Publications

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Jespersen, S. N. & Blumen, A. (2000). Small-world networks: Links with long-tailed distributions. Physical Review E, 62(5), 6270-6274.

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2017). White Matter Biomarkers from Fast Protocols Using Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 1742)

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Eskildsen, S. F., Østergaard, L. & Jespersen, S. N. (2017). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging. NMR in Biomedicine, 30(9), Article e3741. https://doi.org/10.1002/nbm.3741

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2016). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging.

Jespersen, S. (2018). White matter biomarkers from diffusion MRI. Journal of Magnetic Resonance, 291, 127-140. https://doi.org/10.1016/j.jmr.2018.03.001

Hansen, B. & Jespersen, S. N. (2007). Vandets tumlen giver viden om hjernen. Aktuel Naturvidenskab, 1, 10-13.

Hansen, B. & Jespersen, S. N. (2007). Vandets tumlen giver viden om hjernen. Aktuel Naturvidenskab, (1), 10-13.

Lundell, H., Dyrby, T., Hubbard Cristinacce, P., Zhou, F.-L., Parker, G. & Jespersen, S. N. (2015). Validation of Double Diffusion Schemes of Microscopic Fractional Anisotropy. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Hansen, M. B., Jespersen, S. N., Leighland, L. & Kroenke, C. (2013). Using diffusion anisotropy to characterize neuronal morphology in gray matter: the orientation distribution of axons and dendrites in the NeuroMorpho.org database. Frontiers in Integrative Neuroscience, 7.

Jespersen, S. & Plischke, M. (2003). Transport properties of incipient gels. Physical Review E, 68(2), Article 21403. https://doi.org/10.1103/PhysRevE.68.021403

Engedal, T. S., Hjort, N., Hougaard, K. D., Simonsen, C. Z., Andersen, G., Mikkelsen, I. K., Boldsen, J. K., Eskildsen, S. F., Hansen, M. B., Angleys, H., Jespersen, S. N., Pedraza, S., Cho, T.-H., Serena, J., Siemonsen, S., Thomalla, G., Nighoghossian, N., Fiehler, J., Mouridsen, K. & Østergaard, L. (2018). Transit time homogenization in ischemic stroke - A novel biomarker of penumbral microvascular failure? Journal of Cerebral Blood Flow and Metabolism, 38(11), 2006-2020. https://doi.org/10.1177/0271678X17721666

Henriques, R. N., Jespersen, S., Jones, D. K. & Veraart, J. (2021). Towards more robust and reproducible Diffusion Kurtosis Imaging. 2464. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Towards microstructure-informed QSM: A digital phantom study. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2023). Towards microstructure-informed QSM: A digital phantom study. 1039. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Henriques, R. N., Jespersen, S. N., Jones, D. K. & Veraart, J. (2021). Toward more robust and reproducible diffusion kurtosis imaging. Magnetic Resonance in Medicine, 86(3), 1600-1613. https://doi.org/10.1002/mrm.28730

Sandgaard, A. D., Shemesh, N., Jespersen, S. N. & Kiselev, V. G. (2023). To mask or not to mask? Investigating the impact of accounting for spatial frequency distributions and susceptibility sources on QSM quality. Magnetic Resonance in Medicine, 90(1), 353-362. https://doi.org/10.1002/mrm.29627

Olesen, J. L., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time Dependence of White Matter Biomarkers from Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 0841)

Ianus, A., Jespersen, S. N., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2017). Time Dependence of Microscopic Anisotropy in the Mouse Brain Measured with Double Oscillating Diffusion Encoding (DODE) MRI. In Proceedings of ISMRM 25th Annual Meeting (Vol. 25, pp. 0277)

Lynge Olesen, J., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time dependence of kurtosis and intra-and extra-axonal diffusivity using axisymmetric diffusion kurtosis imaging. Poster session presented at ISMRM Workshop on Quantitative MRI in White Matter Disorders: Useful, Usable, Used?, Vancouver, Canada.

Jespersen, S. N., Hansen, B., Nunes, D. & Shemesh, N. (2016). Time Dependence of Diffusion and Kurtosis Parameters in the Rat Spinal Cord. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). The two-compartment diffusion “standard model” misestimates microscopic anisotropy in-vivo. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Jespersen, S. N. & Østergaard, L. (2012). The roles of cerebral blood flow, capillary transit time heterogeneity, and oxygen tension in brain oxygenation and metabolism. Journal of Cerebral Blood Flow and Metabolism, 32(2), 264-277. https://doi.org/10.1038/jcbfm.2011.153

Østergaard, L., Kristiansen, S. B., Angleys, H., Frøkiær, J., Michael Hasenkam, J., Jespersen, S. N. & Bøtker, H. E. (2014). The role of capillary transit time heterogeneity in myocardial oxygenation and ischemic heart disease. Basic Research in Cardiology, 109(3), Article 409. https://doi.org/10.1007/s00395-014-0409-x

Østergaard, L., Tietze, A., Nielsen, T., Drasbek, K. R., Mouridsen, K., Jespersen, S. N. & Horsman, M. R. (2013). The relationship between tumor blood flow, angiogenesis, tumor hypoxia, and aerobic glycolysis. Cancer Research, 73(18), 5618-5624. https://doi.org/10.1158/0008-5472.CAN-13-0964

Chuhutin, A., Khan, A. R., Hansen, B. & Jespersen, S. N. (2015). The Mean Kurtosis Evaluation Measurements Show a Considerable Disparity from the Analytically Evaluated Ones for a Clinically Used Range of B-Values. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Sandgaard, A. D., Shemesh, N., Østergaard, L., Kiselev, V. G. & Jespersen, S. N. (2024). The Larmor frequency shift of a white matter magnetic microstructure model with multiple sources. NMR in Biomedicine, 37(8), Article e5150. https://doi.org/10.1002/nbm.5150

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). The Larmor Frequency of a White Matter Magnetic Microstructure Model with Multiple Sources. 2458. Abstract from Joint Annual Meeting ISMRM-ESMRMB
& ISMRT 31st Annual Meeting, London, United Kingdom.

Jespersen, S., Pedersen, M. & Stødkilde-Jørgensen, H. (2005). The influence of a cellular size distribution on NMR diffusion measurements. Eur Biophys, 34, 890-898. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Citation&list_uids=15886986

Jespersen, S., Pedersen, M. & Stødkilde-Jørgensen, H. (2004). The influence of a cellular size distribution on MR diffusion measurements. Poster session presented at ESMRMB 2004, København, Denmark.

Chuhutin, A., Shemesh, N., Hansen, B. & Jespersen, S. N. (2016). The Importance of B-Values Selection and the Precision of Diffusion Kurtosis Estimation by the Conventional Schemes. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Lee, H.-H., Jespersen, S. N., Fieremans, E. & Novikov, D. S. (2020). The impact of realistic axonal shape on axon diameter estimation using diffusion MRI. NeuroImage, 223, Article 117228. https://doi.org/10.1016/j.neuroimage.2020.117228

Rasmussen, P. M., Jespersen, S. N. & Ostergaard, L. (2015). The effects of transit time heterogeneity on brain oxygenation during rest and functional activation. Journal of Cerebral Blood Flow and Metabolism, 35(3), 432-42. https://doi.org/10.1038/jcbfm.2014.213

Gutiérrez-Jiménez, E., Angleys, H., Rasmussen, P. M., Mikkelsen, I. K., Mouridsen, K. & Østergaard, L. (2018). The effects of hypercapnia on cortical capillary transit time heterogeneity (CTH) in anesthetized mice. Journal of Cerebral Blood Flow and Metabolism, 38(2), 290-303. Article 271678X17692598. https://doi.org/10.1177/0271678X17692598

Angleys, H., Jespersen, S. & Østergaard, L. (2016). The effects of capillary transit time heterogeneity (CTH) on the cerebral uptake of glucose and glucose analogs: Application to FDG and comparison to oxygen uptake. Frontiers in Computational Neuroscience, 10(OCT), Article 103. https://doi.org/10.3389/fncom.2016.00103

Angleys, H., Jespersen, S. & Østergaard, L. (2018). The effects of capillary transit time heterogeneity (CTH) on the BOLD signal. Human Brain Mapping, 39(6), 2329-2352. https://doi.org/10.1002/hbm.23991

Angleys, H., Østergaard, L. & Jespersen, S. N. (2015). The effects of capillary transit time heterogeneity (CTH) on brain oxygenation. Journal of Cerebral Blood Flow and Metabolism, 35(5), 806-17. https://doi.org/10.1038/jcbfm.2014.254

Østergaard, L., Finnerup, N. B., Terkelsen, A. J., Olesen, R. A., Drasbek, K. R., Knudsen, L., Jespersen, S. N., Frystyk, J., Charles, M., Thomsen, R. W., Christiansen, J. S., Beck-Nielsen, H., Jensen, T. S. & Andersen, H. (2015). The effects of capillary dysfunction on oxygen and glucose extraction in diabetic neuropathy. Diabetologia, 58(4), 666-677. https://doi.org/10.1007/s00125-014-3461-z

Jespersen, S., Pedersen, M. & Stødkilde-Jørgensen, H. (2005). The effects of a cellular polydispersity on constant-time diffusion. Abstract from ISMRM 2005, Miami, United States.

Frøhlich, A. F., Jespersen, S. N., Østergaard, L. & Kiselev, V. G. (2008). The effect of impermeable boundaries of arbitrary geometry on the apparent diffusion coefficient. Journal of Magnetic Resonance, 194(1), 128-35. https://doi.org/10.1016/j.jmr.2008.06.009

Garza-Villarreal, E. A., Mallar, C., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2016). The effect of crack cocaine addiction on the microstructure and morphology of the human striatum and thalamus using novel shape analysis and fast diffusion kurtosis imaging. (066647 ed.) https://doi.org/10.1101/066647

Garza-Villarreal, E. A., Chakravarty, M. M., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2017). The effect of crack cocaine addiction and age on the microstructure and morphology of the human striatum and thalamus using shape analysis and fast diffusion kurtosis imaging. Translational Psychiatry, 7(5), Article 1122. https://doi.org/10.1038/tp.2017.92

Jespersen, S. N. & Buhl, N. (2011). The displacement correlation tensor: Microstructure, ensemble anisotropy and curving fibers. Journal of Magnetic Resonance, 208(1), 34-43.

Jespersen, S. N., Leighland, L., Cornea, A. & Kroenke, C. (2009). The diffusion tensor reveals gray matter architecture. Abstract from ISMRM Annual meeting 2009, Honolulu, United States.

Leigland, L., Jespersen, S. N., Taber, E., Bock, A., Cornea, A., Olivierra, J. & Kroenke, C. (2010). The Complexity of Dendritic Arbors in the Developing Cerebral Cortex Determined by Diffusion Tensor Magnetic Resonance Imaging. Abstract from 51st Experimental Nuclear Magnetic Resonance Conference.

Østergaard, L., Aamand, R., Gutiérrez Jiménez, E., Ho, Y. C. L., Blicher, J., Madsen, S. M., Nagenthiraja, K., Dalby, R. B., Drasbek, K. R., Møller, A., Brændgaard, H., Mouridsen, K., Jespersen, S. N., Jensen, M. S. & West, M. J. (2013). The capillary dysfunction hypothesis of Alzheimer's disease. Neurobiology of Aging, 34(4), 1018-31. https://doi.org/10.1016/j.neurobiolaging.2012.09.011

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2023). Tensor denoising of multidimensional MRI data. Magnetic Resonance in Medicine, 89(3), 1160-1172. https://doi.org/10.1002/mrm.29478

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. (2022). Tensor denoising of high-dimensional MRI data.

Nunes, D., Cruz, T., Jespersen, S. N. & Shemesh, N. (2016). Susceptibility-Driven Oscillations in Multi-Gradient-Echo MRI Reflect Axonal Microstructures. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Summary of high field diffusion MRI and microscopy data demonstrate microstructural aberration in chronic mild stress rat brain. Data in Brief, 8, 934-937. https://doi.org/10.1016/j.dib.2016.06.061

Bay, V., Kjølby, B. F., Iversen, N. K., Mikkelsen, I. K., Ardalan, M., Nyengaard, J. R., Jespersen, S. N., Drasbek, K. R., Østergaard, L. & Hansen, B. (2018). Stroke infarct volume estimation in fixed tissue: Comparison of diffusion kurtosis imaging to diffusion weighted imaging and histology in a rodent MCAO model. PLoS One, 13(4), e0196161. Article e0196161. https://doi.org/10.1371/journal.pone.0196161

Lynge Olesen, J. & Jespersen, S. (2020). Stick power law scaling in neurons withstands realistic curvature and branching. 0716. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Jespersen, S. N., Sokolov, I. M. & Blumen, A. (2000). Small-world rouse networks as models of cross-linked polymers. Journal of Chemical Physics, 113(17), 7652-7655.

Jespersen, S. N., Sokolov, I. M. & Blumen, A. (2001). Small world networks. Poster session presented at Networks in Physics 2001, Göttingen, Germany.

Sandgaard, A. D. & Jespersen, S. (2020). Sharper Images in Quantitative Susceptibility Mapping with Magnetometric Dipole Kernels. 3197. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Sandgaard, A. D., Kiselev, V., Shemesh, N. & Jespersen, S. (2021). Rotation-Free Mapping of Magnetic Tissue Properties in White Matter. 3967. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Sandgaard, A. D. & Jespersen, S. (2025). Rotation-Free Estimation of Anisotropic Transverse Relaxation & Larmor Frequency with Diffusion MRI: A Monte Carlo Study in Axonal Phantoms. Abstract from 2025 ISMRM & ISMRT Annual Meeting & Exhibition, Honolulu, United States. https://submissions.mirasmart.com/ISMRM2025/Itinerary/ConferenceMatrixEventDetail.aspx?ses=D-107

Jespersen, S. N., Lundell, H., Sønderby, C. & Dyrby, T. (2013). Rotationally invariant double pulsed field gradient diffusion imaging. Abstract from ISMRM 2013, Salt Lake City, United States.

Alves, R., Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Resolving the underlying sources of diffusion kurtosis in focal ischemia by Correlation Tensor MRI. 0403. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Coelho, S., Pozo, J. M., Jespersen, S. N., Jones, D. K. & Frangi, A. F. (2019). Resolving degeneracy in diffusion MRI biophysical model parameter estimation using double diffusion encoding. Magnetic Resonance in Medicine, 82(1), 395-410. https://doi.org/10.1002/mrm.27714

Mouridsen, K., Hansen, M. B., Østergaard, L. & Jespersen, S. N. (2014). Reliable estimation of capillary transit time distributions using DSC-MRI. Journal of Cerebral Blood Flow and Metabolism, 34(9), 1511-21. https://doi.org/10.1038/jcbfm.2014.111

Mouridsen, K., Østergaard, L., Christensen, S. & Jespersen, S. N. (2011). Reliable estimation of capillary transit time distributions at voxel-level using DSC-MRI.

Jespersen, S. N., Sokolov, I. M. & Blumen, A. (2000). Relaxation properties of small-world networks. Physical Review E, 62(3), 4405-4408.

Hansen, B. & Jespersen, S. (2017). Recent developments in fast kurtosis imaging. Frontiers in Physics, 5(SEP), Article 40. https://doi.org/10.3389/fphy.2017.00040

Vukovic, N., Hansen, B., Lund, T. E., Jespersen, S. & Shtyrov, Y. (2021). Rapid microstructural plasticity in the cortical semantic network following a short language learning session. PLoS Biology, 19(6), Article e3001290. https://doi.org/10.1371/journal.pbio.3001290

Novikov, D. S., Fieremans, E., Jespersen, S. N. & Kiselev, V. G. (2019). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation. NMR in Biomedicine, 32(4), Article e3998. https://doi.org/10.1002/nbm.3998

Novikov, D. S., Jespersen, S. N., Kiselev, V. G. & Fieremans, E. (2016). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Propagation of Bias in Moment-Matching Based Standard Model Parameter Estimation. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Sandgaard, A. D., Jespersen, S., Alstrup, A. K. O., Möller, H., Pampel, A., Wallstein, N., Mildner, T. & Jäger, C. (2025). Predicting Mesoscopic Larmor Frequency Shifts with Diffusion MRI in Ex Vivo Pig Optic Nerve. https://submissions.mirasmart.com/ISMRM2025/Itinerary/ConferenceMatrixEventDetail.aspx?ses=O-35

Sandgaard, A. D. & Jespersen, S. (2025). Predicting Mesoscopic Larmor Frequency Shifts in White Matter With Diffusion MRI—A Monte Carlo Study in Axonal Phantoms. NMR in Biomedicine, 38(3), Article e70004. https://doi.org/10.1002/nbm.70004

Sandgaard, A. D. & Jespersen, S. (2025). Predicting Mesoscopic Larmor Frequency Shifts in White Matter with Diffusion MRI - A Monte-Carlo Study in Axonal Phantoms. Abstract from 2025 ISMRM & ISMRT Annual Meeting & Exhibition, Honolulu, United States. https://submissions.mirasmart.com/ISMRM2025/Itinerary/ConferenceMatrixEventDetail.aspx?ses=D-107

Chuhutin, A., Hansen, B. & Jespersen, S. N. (2017). Precision and accuracy of diffusion kurtosis estimation and the influence of b-value selection. NMR in Biomedicine, 30(11), Article e3777. https://doi.org/10.1002/nbm.3777

Olesen, J. L., Shemesh, N. & Jespersen, S. (2021). Power-law scaling of the diffusion signal in gray matter and the influence of exchange. 0643. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Micklander, E., van den Berg, F., Thybo, A. K., Jespersen, S. & Stødkilde-Jørgensen, H. (2005). Potato texture: digging deep with magnetic resonance imaging and chemometrics. Poster session presented at Food Congress 2005 - from Molecule to Man, DTU, Denmark.

Jespersen, S. N., Oshanin, G. & Blumen, A. (2001). Polymer dynamics in time-dependent Matheron-de Marsily flows: An exactly solvable model. Physical Review E, 63(1), 6.

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2013). Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments. NMR in Biomedicine, 26, 1647-1662. https://doi.org/10.1002/nbm.2999

Coelho, S., Pozo, J. M., Jespersen, S., Frangi, A. F., Novikov, D. S. & Fieremans, E. (2020). Optimal experimental design in multidimensional diffusion MRI for parameter estimation of biophysical tissue models. 0731. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Coelho, S., Pozo, J. M., Jespersen, S. N. & Frangi, A. F. (2019). Optimal Experimental Design for Biophysical Modelling in Multidimensional Diffusion MRI. In D. Shen, T. Liu, T. M. Peters, L. H. Staib, C. Essert, S. Zhou, P.-T. Yap & A. Khan (Eds.), Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings: Proceedings (Vol. III, pp. 617-625). Springer. https://doi.org/10.1007/978-3-030-32248-9_69

Vinding, M. S., Maximov, I., Tosner, Z., Jespersen, S. N. & Nielsen, N. C. (2011). Optimal Control Theory in Magnetic Resonance Imaging: Global Optima for 2DRF pulses. Poster session presented at 32nd Annual Danish NMR Meeting, Korsør, Denmark.

Novikov, D. S., Kiselev, V. & Jespersen, S. (2018). On modeling. Magnetic Resonance in Medicine, 79(6), 3172– 3193. https://doi.org/10.1002/mrm.27101

Simoes, R., Henriques, R. N., Cardoso, B., Fernandes, F., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Non-invasive assessment of glycolytic and oxidative metabolism in mouse glioma using DGE 2H-MRS. 3718. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Thybo, A., Jespersen, S., Lærke, P. E. & Stødkilde-Jørgensen, H. (2004). Non-destructive detection of internal bruise and spraing disease symptoms in potatoes using magnetic resonance imaging (MRI). Poster session presented at International Conference on Applications of Magnetic Resonance in Food Science, København.

Thybo, A. K., Jespersen, S., Laerke, P. E. & Stødkilde-Jørgensen, H. (2004). Nondestructive detection of internal bruise and spraing disease symptoms in potatoes using magnetic resonance imaging. Magn Reson Imaging, 22(9), 1311-1317.

Østergaard, L., Dreier, J. P., Hadjikhani, N., Jespersen, S. N., Dirnagl, U. & Dalkara, T. (2015). Neurovascular coupling during cortical spreading depolarization and -depression. Stroke; a journal of cerebral circulation, 46(5), 1392-401. https://doi.org/10.1161/STROKEAHA.114.008077

Jespersen, S. N., Bjarkam, C. R., Nyengaard, J. R., Mallar, C., Hansen, B., Vosegaard, T., Østergaard, L., Yablonskiy, DA., Nielsen, N. C. & Vestergaard-Poulsen, P. (2010). Neurite density from magnetic resonance diffusion measurements at ultrahigh field: comparison with light microscopy and electron microscopy. NeuroImage, 49(1), 205-16. https://doi.org/10.1016/j.neuroimage.2009.08.053

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2015). Neurite density from an isotropic diffusion model.

Khan, A. R., Hansen, B., Danladi, J., Chuhutin, A., Wiborg, O., Nyengaard, J. R. & Jespersen, S. (2019). Neurite atrophy in dorsal hippocampus of rat indicates incomplete recovery of chronic mild stress induced depression: Neurite atrophy in the hippocampus show partial recovery of depression. NMR in Biomedicine, 32(3), Article e4057. https://doi.org/10.1002/nbm.4057

Micklander, E., van den Berg, F., Thybo, A. K., Jespersen, S. & Stødkilde-Jørgensen, H. (2004). Multivirate chemometric analsyis of Magnetic Resoancne Images in relation to food quality. Poster session presented at Conference on Applicatio of Magnetic Resonance in Food Science, København, Denmark.

Hansen, B., Jespersen, S. N. & Vestergaard-Poulsen, P. (2008). MR-mikroskopi giver indblik i hjernens mikrostruktur. Poster session presented at Forskningens Dag 2008, Århus, Denmark.

Fernandes, F. F., Olesen, J. L., Jespersen, S. N. & Shemesh, N. (2023). MP-PCA denoising of fMRI time-series data can lead to artificial activation “spreading”. NeuroImage, 273, Article 120118. https://doi.org/10.1016/j.neuroimage.2023.120118

Jespersen, S. N., Ashkanian, M., Mouridsen, K. & Østergaard, L. (2008). Modelling the regulation of cerebral oxygen extraction by flow heterogeneity. Poster session presented at Forskningens dag, Århus, Denmark.

Jespersen, S. N., Ashkanian, M., Mouridsen, K. & Østergaard, L. (2008). Modelling the regulation of cerebral oxygen extraction by flow heterogeneity. Abstract from International society of magnetic resonance in medicine, annual meeting 2008, Toronto, Canada.

Jespersen, S. N. (2008). Modellering af vanddiffusion i hjernen - et værktøj til måling af fibertæthed?. Poster session presented at Forskningens dag, Århus, Denmark.

Jespersen, S. N., Ashkanian, M., Mouridsen, K. & Østergaard, L. (2007). Modeling the regulation of cerebral oxygenextraction by flow heterogeneity. Abstract from Workshop on cerebral perfusion and brain function 2007, Salvador da Bahia, Brazil.

Angleys, H. & Østergaard, L. (2022). Modeling the measurement bias in interstitial glucose concentrations derived from microdialysis in skeletal muscle. Physiological Reports, 10(8), Article e15252. https://doi.org/10.14814/phy2.15252

Jespersen, S. N., Kroenke, CD., Østergaard, L., Ackerman, JJ. & Yablonskiy, DA. (2007). Modeling dendrite density from magnetic resonance diffusion measurements. NeuroImage, 34(4), 1473-1486. https://doi.org/10.1016/j.neuroimage.2006.10.037

Næss-Schmidt, E. T., Blicher, J. U., Eskildsen, S. F., Tietze, A., Hansen, B., Stubbs, P. W., Jespersen, S., Østergaard, L. & Nielsen, J. F. (2017). Microstructural changes in the thalamus after mild traumatic brain injury: A longitudinal diffusion and mean kurtosis tensor MRI study. Brain Injury, 31(2), 230-236. https://doi.org/10.1080/02699052.2016.1229034

Næss-Schmidt, E. T., Udby Blicher, J., Møller Thastum, M., Rask, C. U., Wulff Svendsen, S., Schröder, A., Tuborgh, A. H., Østergaard, L., Sangill, R., Lund, T., Nørhøj Jespersen, S., Pedersen, A. R., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2021). Microstructural changes in the brain after long-term post-concussion symptoms: A randomized trial. Journal of Neuroscience Research, 99(3), 872-886. https://doi.org/10.1002/jnr.24773

Khan, A. R., Jespersen, S., Wiborg, O., Kroenke, C. & Hansen, B. (2018). Microstructural and Metabolic Recovery of Anhedonic Rat Brains: An In Vivo Diffusion MRI and 1H-MRS Approach. Data, 3(3), Article 29. https://doi.org/10.3390/data3030029

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2019). Microscopic anisotropy misestimation in spherical-mean single diffusion encoding MRI. Magnetic Resonance in Medicine, 81(5), 3245-3261. https://doi.org/10.1002/mrm.27606

Østergaard, L., Granfeldt, A., Secher, N., Tietze, A., Iversen, N. K., Jensen, M. S., Andersen, K. K., Nagenthiraja, K., Gutiérrez-Lizardi, P., Mouridsen, K., Jespersen, S. N. & Tønnesen, E. K. (2015). Microcirculatory dysfunction and tissue oxygenation in critical illness. Acta Anaesthesiologica Scandinavica, 59(10), 1246-59. https://doi.org/10.1111/aas.12581

Henriques, R. N., Olesen, J. L., Jespersen, S. & Shemesh, N. (2020). Measuring the full diffusional intra- and inter-compartmental kurtosis tensors using double diffusion encoding. 0742. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Tietze, A., Hansen, M. B., Østergaard, L., Jespersen, S. N., Sangill, R., Lund, T. E., Geneser, M., Hjelm, M. & Hansen, B. (2015). Mean Diffusional Kurtosis in Patients with Glioma: Initial Results with a Fast Imaging Method in a Clinical Setting. American Journal of Neuroradiology, 36(8), 1472-1478. https://doi.org/10.3174/ajnr.A4311

Sandgaard, A. D., Shemesh, N., Jespersen, S. & Kiselev, V. G. (2022). Masking the measured volume improves QSM quality. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Nunes, D., Cruz, T. L., Jespersen, S. N. & Shemesh, N. (2017). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. Journal of Magnetic Resonance, 277, 117. https://doi.org/10.1016/j.jmr.2017.02.017

Nunes, D., Cruz, T. L., Jespersen, S. & Shemesh, N. (2016). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. ArXiv.

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D., Østergaard, L. & Jespersen, S. (2019). Longitudinal, multiparametric MRI of repetitive mild traumatic brain injury in rats. 53-54. Abstract from Neuroscience Day 2019, Aarhus, Denmark.

Khan, A. R., Hansen, B., Iversen, N. K., Angoa-Perez, M., Kuhn, D. & Jespersen, S. (2018). Longitudinal metabolic alterations in the cerebral cortex of rats after repetitive mild traumatic brain injury. 1.

Jespersen, S. N., Metzler, R. & Fogedby, H. (1999). Levy Flights in External Force Fields: Langevin and Fractional Fokker-Planck Equations. Physical Review E, 59, 2736-2745.

Jespersen, S. N. & Fogedby, H. (1999). Levy Flights. Poster session presented at Dansk Fysisk Selskab 1999, Nyborg, Denmark.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. N. (2023). Larmor frequency shift from magnetized cylinders with arbitrary orientation distribution. NMR in Biomedicine, 36(3), Article e4859. https://doi.org/10.1002/nbm.4859

Hansen, B. & Jespersen, S. N. (2016). Kurtosis fractional anisotropy: its contrast and estimation by proxy. Scientific Reports, 6(23999), Article 23999.

Angleys, H. & Østergaard, L. (2020). Krogh's capillary recruitment hypothesis, 100 years on: Is the opening of previously closed capillaries necessary to ensure muscle oxygenation during exercise? A J P: Heart and Circulatory Physiology (Online), 318(2), H425-H447. https://doi.org/10.1152/ajpheart.00384.2019

Jespersen, S. N. (2025). Isotropic sampling of tensor-encoded diffusion MRI. Magnetic Resonance in Medicine, 93(5), 2040-2048. https://doi.org/10.1002/mrm.30404

Hochreuter, K., Buti, G., Ajdari, A., Bridge, C. P., Sharp, G. C., Jespersen, S., Lukacova, S., Bortfeld, T. & Kallehauge, J. F. (2025). Investigating the potential of diffusion tensor atlases to generate anisotropic clinical tumor volumes in glioblastoma patients. Physics and Imaging in Radiation Oncology, 33, Article 100688. https://doi.org/10.1016/j.phro.2024.100688

Chen, G., Jespersen, S., Pedersen, M., Qi, P., Horsman, M. R. & Stødkilde-Jørgensen, H. (2005). Intravenous administration of Gd-DTPA prior to DWI does not affect the apparent diffusion constant. Magn Reson Imaging, 23(5), 685-689. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Citation&list_uids=16051044

Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Intra-compartmental kurtosis biases tensor-valued multidimensional diffusion. 2463. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting. https://www.ismrm.org/21/program-files/TeaserSlides/TeasersPresentations/2463-Teaser.html

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Nielsen, R. B., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Lund, T. E., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2017). Increased cortical capillary transit time heterogeneity in Alzheimer’s disease: a DSC-MRI perfusion study. Neurobiology of Aging, 50, 107-118. https://doi.org/10.1016/j.neurobiolaging.2016.11.004

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2013). Increased cerebral oxygen extraction capacity in patients with Alzheimer’s disease. Abstract from Alzheimer's Association International Conference, Boston, United States. https://doi.org/10.1016/j.jalz.2013.05.173

Sandgaard, A. D., Kiselev, V. G., Henriques, R. N., Shemesh, N. & Jespersen, S. N. (2024). Incorporating the effect of white matter microstructure in the estimation of magnetic susceptibility in ex vivo mouse brain. Magnetic Resonance in Medicine, 91(2), 699-715. https://doi.org/10.1002/mrm.29867

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. (2023). Incorporating susceptibility effects into the Standard Model of diffusion in white matter. Abstract from Gordon Research Conference on Tissue Microstructure
Imaging, Easton, Massachusetts, United States.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. (2023). Incorporating susceptibility effects into the standard model of diffusion in white matter. 0975. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Incorporating Orientation-Dependent Susceptibility Effects in the Standard Model of Diffusion in White Matter. Abstract from ISMRM Workshop on Diffusion MRI
, Amsterdam, Netherlands.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2023). Including mesoscopic frequency shifts from fibrous structure of white matter improves accuracy of QSM. 4177. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Jespersen, S., Olesen, J. L., Ianus, A. & Shemesh, N. (2018). Implications of nongaussian diffusion on the interpretation of multidimensional diffusion measurements. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Chan, K. S., Ma, Y., Lee, H., Marques, J. P., Olesen, J. L., Coelho, S., Novikov, D. S., Jespersen, S. N., Huang, S. Y. & Lee, H. H. (2025). In vivo human neurite exchange time imaging at 500 mT/m diffusion gradients. Imaging Neuroscience, 3, Article imag_a_00544. https://doi.org/10.1162/imag_a_00544

Thaler, C., Kyselyova, A. A., Faizy, T. D., Nawka, M. T., Jespersen, S., Hansen, B., Stellmann, J.-P., Heesen, C., Stürner, K. H., Stark, M., Fiehler, J., Bester, M. & Gellißen, S. (2021). Heterogeneity of multiple sclerosis lesions in fast diffusional kurtosis imaging. PLoS One, 16(2), Article e0245844. https://doi.org/10.1371/journal.pone.0245844

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D. & Jespersen, S. (2019). Functional and microstructural alterations in the rat hippocampus after repetitive mild traumatic brain injury. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Hansen, B., Shemesh, N. & Jespersen, S. N. (2016). Fast imaging of mean, axial and radial diffusion kurtosis. NeuroImage, 142, 381. https://doi.org/10.1016/j.neuroimage.2016.08.022

Kjølby, B. F., Khan, A. R., Chuhutin, A., Pedersen, L. H., Jensen, J. B., Jakobsen, S., Zeidler, D., Sangill, R., Nyengaard, J. R., Jespersen, S. N. & Hansen, B. (2016). Fast diffusion kurtosis imaging of fibrotic mouse kidneys. NMR in Biomedicine, 29(12), 1709.

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. (2018). Ex-vivo diffusion MRI reveals microstructural alterations in stress-sensitive brain regions: A chronic mild stress recovery study. Abstract from Joint ISMRM and ESMRMB conference, Paris, Paris, France.

Rydtoft, L. M., Hansen, B., Hansen, M. B. & Jespersen, S. N. (2014). Experimentally Estimated Non-Gaussian Water Diffusion at a Large Range of B-Values. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2013). Experimentally and computationally fast method for estimation of a mean kurtosis. Abstract from International Society for Magnetic Resonance in Medicine 21st Annual Meeting and Exhibition, Salt Lake City, UT, United States.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2013). Experimentally and computationally fast method for estimation of a mean kurtosis. Magnetic Resonance in Medicine, 69(6), 1754-1760. https://doi.org/10.1002/mrm.24743

Hansen, B., Lund, T. E., Sangill, R., Stubbe, E., Finsterbusch, J. & Jespersen, S. N. (2015). Experimental considerations for fast kurtosis imaging. Magnetic Resonance in Medicine, 76, 1455-1468. https://doi.org/10.1002/mrm.26055

Buhl, N. & Jespersen, S. N. (2010). Exact results for diffusion weighted MR on branched structures. In Proc. Intl. Soc. Mag. Reson. Med. (Vol. 18)

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2021). Evidence for microscopic kurtosis in neural tissue revealed by correlation tensor MRI. Magnetic Resonance in Medicine, 86(6), 3111-3130. https://doi.org/10.1002/mrm.28938

Does, M. D., Olesen, J. L., Harkins, K. D., Serradas-Duarte, T., Gochberg, D. F., Jespersen, S. N. & Shemesh, N. (2019). Evaluation of principal component analysis image denoising on multi-exponential MRI relaxometry. Magnetic Resonance in Medicine, 81(6), 3503-3514. https://doi.org/10.1002/mrm.27658

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). EVALUATION OF PCA DENOISING OF MRI RELAXOMETRY DATA. In Proceedings of 2018 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2018)

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). Evaluation of Marchenko-Pastur PCA denoising on Multi-Exponential Relaxometry. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Chen, G., Jespersen, S., Pedersen, M., Pang, Q., Horsman, M. R. & Stødkilde-Jørgensen, H. (2005). Evaluation of anti-vascular therapy with texture analysis. Anticancer Research, 25(5), 3399-3405. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Citation&list_uids=16101155

Madsen, L. S., Thomsen, M. K., Angleys, H., Mikkelsen, I. K., Brooks, D. J., Eskildsen, S. F. & Østergaard, L. (2025). Estimation of oxygen extraction fraction based on hemodynamic measurements using DSC-MRI. Imaging Neuroscience, 3, Article imag_a_00562. https://doi.org/10.1162/imag_a_00562

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2014). Erratum: Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments. NMR in Biomedicine, 27(6), 738-738. https://doi.org/10.1002/nbm.3125

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2014). Erratum: Hansen, Lund, Sangill, and Jespersen. Experimentally and Computationally Fast Method for Estimation of a Mean Kurtosis. Magnetic Resonance in Medicine 69:1754–1760 (2013). Magnetic Resonance in Medicine, 71(6), 2250. https://doi.org/10.1002/mrm.25090

Jespersen, S. N. (2012). Equivalence of double and single wave vector diffusion contrast at low diffusion weighting. NMR in Biomedicine, 25(6), 813-818. https://doi.org/10.1002/nbm.1808

Fernandes, F., Gil, R., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Enhanced conventional and ultrafast responses in preclinical functional MRI using MP-PCA denoising. 2915. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Ianuş, A., Novello, L., Jovicich, J., Jespersen, S. N. & Shemesh, N. (2023). Efficient PCA denoising of spatially correlated redundant MRI data. Imaging Neuroscience, 1, 1-26. https://doi.org/10.1162/imag_a_00049

Gaemelke, T., Laustsen, C., Feys, P., Folkestad, L., Andersen, M. S., Jørgensen, N. R., Jørgensen, M.-L., Jespersen, S. N., Ringgaard, S., Eskildsen, S. F., Dalgas, U. & Hvid, L. G. (2024). Effects of power training in older patients with multiple sclerosis on neurodegeneration, neuromuscular function, and physical function: A study protocol for the "power training in older multiple sclerosis patients (PoTOMS) randomized control trial. Contemporary Clinical Trials Communications, 38, Article 101279. https://doi.org/10.1016/j.conctc.2024.101279

Jespersen, S., Lynge Olesen, J., Ianuş, A. & Shemesh, N. (2019). Effects of nongaussian diffusion on “isotropic diffusion“ measurements: an ex-vivo microimaging and simulation study. Journal of Magnetic Resonance, 300, 84-94. https://doi.org/10.1016/j.jmr.2019.01.007

Gutiérrez-Jiménez, E., Cai, C., Mikkelsen, I. K., Rasmussen, P. M., Angleys, H., Merrild, M., Mouridsen, K., Jespersen, S. N., Lee, J., Iversen, N. K., Sakadzic, S. & Østergaard, L. (2016). Effect of electrical forepaw stimulation on capillary transit-time heterogeneity (CTH). Journal of Cerebral Blood Flow and Metabolism, 36(12), 2072-2086. https://doi.org/10.1177/0271678X16631560

Jespersen, S., Fieremans, E. & Novikov, D. S. (2019). Effective medium theory of multiple diffusion encoding. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Jespersen, S. N. (2022). Editor's Choice: What does filter exchange imaging measure? NMR in Biomedicine, 35(12), Article e4829. https://doi.org/10.1002/nbm.4829

Valette, J., Ronen, I. & Jespersen, S. N. (2019). Editorial: Assessing cellular microstructure in biological tissues using in vivo diffusion-weighted magnetic resonance. Frontiers in Physics, 7, Article 37. https://doi.org/10.3389/fphy.2019.00037

Simoes, R., Isturiz, J., Lynge Olesen, J., Jespersen, S. & Shemesh, N. (2020). Dynamic assessment of early metabolic perturbations in glioma-bearing mice using denoised 2H-MRS. 0475. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Jespersen, S. N., Sokolov, I. M. & Blumen, A. (1999). Dynamical aspects of small world networks. Poster session presented at Dansk Fysisk Selskab 1999, Nyborg, Denmark.

Coelho, S., Pozo, J. M., Jespersen, S., Jones, D. K. & Frangi, A. F. (2019). Double diffusion encoding enables unique parameter estimation of the Standard Model in diffusion MRI. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Henriques, R. N., Palombo, M., Jespersen, S. N., Shemesh, N., Lundell, H. & Ianuş, A. (2021). Double diffusion encoding and applications for biomedical imaging. Journal of Neuroscience Methods, 348, Article 108989. https://doi.org/10.1016/j.jneumeth.2020.108989

Jespersen, S. N. & Gjedde, A. (2007). Dopamine occupancy and dopamine transport inhibition: Lessons from a dynamic model. Abstract from BrainPET'07, Osaka, Japan.

Gutierrez-Jimenez, E., Angleys, H., Rasmussen, P. M., West, M. J., Catalini, L., Iversen, N. K., Jensen, M. S., Frische, S. & Ostergaard, L. (2018). Disturbances in the control of capillary flow in an aged APP(swe)/PS1 Delta E9 model of Alzheimer's disease. Neurobiology of Aging, 62, 82-94. https://doi.org/10.1016/j.neurobiolaging.2017.10.006

Haack, S., Tanderup, K., Kallehauge, J., Lindegaard, J. C., Morre-Pedersen, E. & Jespersen, S. N. (2014). Diffusion Weighted MRI for Radiotherapy Treatment of Locally Advanced Cervical Cancer – Treatment Response Assessment Using Different Segmentation Methods. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Haack, S., Jespersen, S. N., Fokdal, L., Lindegaard, J. C., Tanderup, K., Kallehauge, J. F. & Pedersen, E. M. (2011). Diffusion weighted MRI (DWI) for brachytherapy in locally advanced cervical cancer - Determining the degree of distortion at 1.5T and 3T MRI. In IFMBE Proceedings (Vol. 34 IFMBE, pp. 172-175) https://doi.org/10.1007/978-3-642-21683-1_43

Haack, S., Jespersen, S. N., Lars, F., Lindegaard, J. C., Kallehauge, J., Tanderup, K. & Pedersen, E. M. (2011). Diffusion Weighted MRI (DWI) for Brachytherapy in Locally Advanced Cervical Cancer - Determining the Degree of Distortion at 1.5T and 3T. International Federation for Medical and Biological Engineering Proceedings, 34, 172-175. http://books.google.dk/books?id=Oo9bujV0NikC&printsec=frontcover&hl=da&source=gbs_ge_summary_r&cad=0#v=onepage&q&f=false

Haack, S., Tanderup, K., Fokdal, L., Kallehauge, J. F., Lindegaard, J. C., Jespersen, S. N. & Pedersen, E. M. (2013). Diffusion Weighted MRI as a predictive tool for effect of radiotherapy in locally advanced cervical cancer. Poster session presented at ISMRM 2013, Salt Lake City, United States.

Vestergaard-Poulsen, P., Wegener, G., Hansen, B., Bjarkam, C. R., Blackband, S. J., Nielsen, N. C. & Jespersen, S. N. (2011). Diffusion-weighted MRI and quantitative biophysical modeling of hippocampal neurite loss in chronic stress. PLoS One, 6(7), e20653. https://doi.org/10.1371/journal.pone.0020653

Haack, S., Tanderup, K., Kallehauge, J. F., Mohamed, S. M. I., Lindegaard, J. C., Pedersen, E. M. & Jespersen, S. N. (2015). Diffusion-weighted magnetic resonance imaging during radiotherapy of locally advanced cervical cancer - treatment response assessment using different segmentation methods. Acta Oncologica, 54(9), 1535-1542. https://doi.org/10.3109/0284186X.2015.1062545, https://doi.org/10.3109/0284186X.2015.1062545

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2022). Diffusion time dependence, power-law scaling, and exchange in gray matter. NeuroImage, 251, Article 118976. https://doi.org/10.1016/j.neuroimage.2022.118976

Jespersen, S. N., Olesen, J. L., Hansen, B. & Shemesh, N. (2018). Diffusion time dependence of microstructural parameters in fixed spinal cord. NeuroImage, 182, 329-342. https://doi.org/10.1016/j.neuroimage.2017.08.039

Bock, A. S., Olavarria, J. F., Leigland, L. A., Taber, E. N., Jespersen, S. N. & Kroenke, C. D. (2010). Diffusion tensor imaging detects early cerebral cortex abnormalities in neuronal architecture induced by bilateral neonatal enucleation: an experimental model in the ferret. Frontiers in Systems Neuroscience, 4, 149. https://doi.org/10.3389/fnsys.2010.00149

Næss-Schmidt, E. T., Blicher, J. U., Tietze, A., Rask, C. U., Svendsen, S. W., Schröder, A., Thastum, M. M., Tuborgh, A. H., Frederiksen, O.-V., Østergaard, L., Eskildsen, S. F., Hansen, B., Jespersen, S. & Nielsen, J. F. (2018). Diffusion MRI findings in patients with extensive and minimal post-concussion symptoms after mTBI and healthy controls - a cross sectional study. Brain Injury, 32(1), 91-98. https://doi.org/10.1080/02699052.2017.1377352

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. D. & Jespersen, S. (2018). Diffusion MRI and MR spectroscopy reveal microstructural and metabolic brain alterations in chronic mild stress exposed rats: A CMS recovery study. NeuroImage, 167, 342-353. https://doi.org/10.1016/j.neuroimage.2017.11.053

Kjølby, B. F., Jakobsen, S., Jensen, J., Pedersen, L. H., Rydtoft, L. M., Jespersen, S. N. & Hansen, B. (2015). Diffusion Kurtosis Imaging of Fibrotic Mouse Kidneys. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. N. (2020). Diffusion Kurtosis Imaging maps neural damage in the EAE model of multiple sclerosis. NeuroImage, 208, Article 116406. https://doi.org/10.1016/j.neuroimage.2019.116406

Næss-Schmidt, E., Blicher, J. U., Møller, M. T., Rask, C. U., Svendsen, S. W., Schröder, A., Tuborgh, A. H., Østergaard, L., Jespersen, S., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2019). Diffusion kurtosis imaging in patients with prolonged post-concussion symptoms. Journal of Psychosomatic Research, 121, 123. https://doi.org/10.1016/j.jpsychores.2019.03.073

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. (2019). Diffusion Kurtosis Imaging (DKI) Biomarkers correlate with dysfunction in the EAE model of MS. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Khan, A. R., Kroenke, C. D., Wiborg, O., Chuhutin, A., Nyengaard, J. R., Hansen, B. & Jespersen, S. (2018). Differential microstructural alterations in rat cerebral cortex in a model of chronic mild stress depression. PLoS One, 13(2), e0192329. Article https://doi.org/10.1371/journal.pone.0192329. https://doi.org/10.1371/journal.pone.0192329

Simões, R. V., Henriques, R. N., Olesen, J. L., Cardoso, B. M., Fernandes, F. F., Monteiro, M. AV., Jespersen, S. N., Carvalho, T. & Shemesh, N. (2024). Deuterium Metabolic Imaging Phenotypes Mouse Glioblastoma Heterogeneity Through Glucose Turnover Kinetics. eLife Sciences Publications Ltd. https://doi.org/10.7554/elife.100570.1

Simoes, R. V., Henriques, R. N., Olesen, J. L., Cardoso, B. M., Fernandes, F. F., Monteiro, M. A. V., Jespersen, S. N., Carvalho, T. & Shemesh, N. (2025). Deuterium metabolic imaging phenotypes mouse glioblastoma heterogeneity through glucose turnover kinetics. eLife, 13. https://doi.org/10.7554/eLife.100570

Jespersen, S. N., Leigland, L., Cornea, A. & Kroenke, C. (2012). Determination of Axonal and Dendritic Orientation Distributions Within the Developing Cerebral Cortex by Diffusion Tensor Imaging. IEEE Transactions on Medical Imaging, 31(1), 16-32. https://doi.org/10.1109/TMI.2011.2162099

Jespersen, S. N., Bjarkam, C., Nielsen, T., Hansen, B. & Vestergaard-Poulsen, P. (2007). Dendrite density from magnetic resonance diffusion measurements: Comparison with histology. Abstract from ISMRM 2007, Berlin, Germany.

Hansen, B. & Jespersen, S. N. (2016). Data for evaluation of fast kurtosis imaging, b-value optimization and exploration of diffusion MRI contrast. Scientific Data, 3, Article 160072. https://doi.org/10.1038/sdata.2016.72

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2015). Cortical capillary dysfunction in patients suspected of Alzheimer’s disease. Abstract from The Alzheimer's Association International Conference 2015, Washington D.C., United States. https://doi.org/10.1016/j.jalz.2015.06.1767

Alves, R., Henriques, R. N., Kerkelä, L., Chavarrías, C., Jespersen, S. N. & Shemesh, N. (2022). Correlation Tensor MRI deciphers underlying kurtosis sources in stroke. NeuroImage, 247, Article 118833. https://doi.org/10.1016/j.neuroimage.2021.118833

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2020). Correlation tensor magnetic resonance imaging. NeuroImage, 211, Article 116605. https://doi.org/10.1016/j.neuroimage.2020.116605

Henriques, R. N., Jespersen, S. & Shemesh, N. (2020). Correlation Tensor Imaging - resolving non-Gaussian diffusion sources of in vivo tissues. 0717. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). Correlation Tensor Imaging (CTI): resolving diffusion sources of non-Gaussian diffusion. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Haack, S., Kallehauge, J. F., Jespersen, S. N., Lindegaard, J. C., Tanderup, K. & Pedersen, E. M. (2014). Correction of diffusion-weighted magnetic resonance imaging for brachytherapy of locally advanced cervical cancer. Acta Oncologica, 53(8), 1073-1078. https://doi.org/10.3109/0284186X.2014.938831

Shemesh, N., Jespersen, S. N., Alexander, D. C., Cohen, Y., Drobnjak, I., Dyrby, T. B., Finsterbusch, J., Koch, M. A., Kuder, T., Laun, F., Lawrenz, M., Lundell, H., Mitra, P. P., Nilsson, M., Özarslan, E., Topgaard, D. & Westin, C.-F. (2015). Conventions and nomenclature for double diffusion encoding NMR and MRI. Magnetic Resonance in Medicine, 75(1), 82-87. https://doi.org/10.1002/mrm.25901

Jespersen, S. N. (2013). Comment on “Measuring small compartments with relatively weak gradients by angular double-pulsed-field-gradient NMR” by Morozov Bar, Sochen, and Cohen. Magnetic Resonance Imaging, 31(9), 1643-1644. https://doi.org/10.1016/j.mri.2013.07.006

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2014). Commentary on "Microanisotropy imaging: quantification of microscopic diffusion anisotropy and orientation of order parameter by diffusion MRI with magic-angle spinning of the q-vector". Frontiers in Physics, 2, Article 28. https://doi.org/10.3389/fphy.2014.00028

Jespersen, S. (2002). Cluster diffusion at the gelation point. Physical Review E, 66(3).

Mouridsen, K., Jonsdottir, K. Y., Jespersen, S. N. & Østergaard, L. (2008). Clinical utility of parametric perfusion estimates in prediction of final outcome in acute stroke. Paper presented at International society of magnetic resonance in medicine, annual meeting 2008, Toronto, Canada.