Publications

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Lindhardt, T. B., Stald Skoven, C., Bordoni, L., Østergaard, L., Liang, Z. & Hansen, B. (2024). Anesthesia-related brain microstructure modulations detected by diffusion MRI. NMR in Biomedicine, 37(7), Article e5033. https://doi.org/10.1002/nbm.5033

Rasmussen, M., Koch, K. U., Espelund, U. S., Mohamad, N., Korshøj, A. R., Juul, N., Angleys, H., Meng, L., Østergaard, L. & Mikkelsen, I. K. (2024). Blood-brain Barrier Permeability May Influence Vasopressor Effects in Anesthetized Patients with Brain Tumor: An Analysis of Magnetic Resonance Imaging Data. Journal of Neurosurgical Anesthesiology, 36(4), 357-362. https://doi.org/10.1097/ANA.0000000000000948

Aamand, R., Rasmussen, P. M., Andersen, K. S., de Paoli, S., Weitzberg, E., Christiansen, M., Lund, T. E. & Østergaard, L. (2024). Cerebral microvascular changes in healthy carriers of the APOE-ɛ4 Alzheimer's disease risk gene. PNAS Nexus, 3(9), Article pgae369. https://doi.org/10.1093/pnasnexus/pgae369

Westi, E. W., Molhemi, S., Hansen, C. T., Skoven, C. S., Knopper, R. W., Ahmad, D. A., Rindshøj, M. B., Ameen, A. O., Hansen, B., Kohlmeier, K. A. & Aldana, B. I. (2024). Comprehensive Analysis of the 5xFAD Mouse Model of Alzheimer’s Disease Using dMRI, Immunohistochemistry, and Neuronal and Glial Functional Metabolic Mapping. Biomolecules, 14(10), Article 1294. https://doi.org/10.3390/biom14101294

Hansen, B. (2024). Den neurobiologiske funktion af søvn og drømme. Aktuel Naturvidenskab, 4(1). https://aktuelnaturvidenskab.dk/find-artikel/nyeste-numre/4-2024/den-neurobiologiske-funktion-af-soevn-og-droemme

Lohmeier, J., Radbruch, H., Brenner, W., Hamm, B., Hansen, B., Tietze, A. & Makowski, M. R. (2024). Detection of recurrent high-grade glioma using microstructure characteristics of distinct metabolic compartments in a multimodal and integrative 18F-FET PET/fast-DKI approach. European Radiology, 34(4), 2487–2499. https://doi.org/10.1007/s00330-023-10141-0

Simões, R. V., Henriques, R. N., Olesen, J. L., Cardoso, B. M., Fernandes, F. F., Monteiro, M. AV., Jespersen, S. N., Carvalho, T. & Shemesh, N. (2024). Deuterium Metabolic Imaging Phenotypes Mouse Glioblastoma Heterogeneity Through Glucose Turnover Kinetics. eLife Sciences Publications Ltd. https://doi.org/10.7554/elife.100570.1

Sandgaard, A. D., Kiselev, V. G., Henriques, R. N., Shemesh, N. & Jespersen, S. N. (2024). Incorporating the effect of white matter microstructure in the estimation of magnetic susceptibility in ex vivo mouse brain. Magnetic Resonance in Medicine, 91(2), 699-715. https://doi.org/10.1002/mrm.29867

Sandgaard, A. D., Shemesh, N., Østergaard, L., Kiselev, V. G. & Jespersen, S. N. (2024). The Larmor frequency shift of a white matter magnetic microstructure model with multiple sources. NMR in Biomedicine, 37(8), Article e5150. https://doi.org/10.1002/nbm.5150

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2023). Alveolar bone measurements in magnetic resonance imaging compared with cone beam computed tomography: a pilot, ex-vivo study. Acta Odontologica Scandinavica, 81(3), 241-248. https://doi.org/10.1080/00016357.2022.2121321

Christensen, N. V., Vaeggemose, M., Bøgh, N., Hansen, E. S. S., Olesen, J. L., Kim, Y., Vigneron, D. B., Gordon, J. W., Jespersen, S. N. & Laustsen, C. (2023). A user independent denoising method for x-nuclei MRI and MRS. Magnetic Resonance in Medicine, 90(6), 2539-2556. https://doi.org/10.1002/mrm.29817

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2023). Including mesoscopic frequency shifts from fibrous structure of white matter improves accuracy of QSM. 4177. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. (2023). Incorporating susceptibility effects into the standard model of diffusion in white matter. 0975. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. (2023). Incorporating susceptibility effects into the Standard Model of diffusion in white matter. Abstract from Gordon Research Conference on Tissue Microstructure
Imaging, Easton, Massachusetts, United States.

Hansen, B. (2023). Jagten på biomarkører. In Hjernen og psyken (pp. 45-55). HjerneForum.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. N. (2023). Larmor frequency shift from magnetized cylinders with arbitrary orientation distribution. NMR in Biomedicine, 36(3), Article e4859. https://doi.org/10.1002/nbm.4859

Bertin Markussen, N., Knopper, R. W., Hasselholt, S., Stald Skoven, C., Nyengaard, J. R., Østergaard, L. & Hansen, B. (2023). Locus Coeruleus ablation in mice: protocol optimization, stereology and behavioral impact. Frontiers in Cellular Neuroscience, 17, Article 1138624. https://doi.org/10.3389/fncel.2023.1138624

Knopper, R. W. & Hansen, B. (2023). Locus coeruleus and the defensive activation theory of rapid eye movement sleep: A mechanistic perspective. Frontiers in Neuroscience, 17, Article 1094812. https://doi.org/10.3389/fnins.2023.1094812

Johannsen, K. M., de Carvalho E Silva Fuglsig, J. M., Hansen, B., Wenzel, A. & Spin-Neto, R. (2023). Magnetic resonance imaging artefacts caused by orthodontic appliances and/or implant-supported prosthesis: a systematic review. Oral Radiology, 39(2), 394-407. https://doi.org/10.1007/s11282-022-00652-9

Fernandes, F. F., Olesen, J. L., Jespersen, S. N. & Shemesh, N. (2023). MP-PCA denoising of fMRI time-series data can lead to artificial activation “spreading”. NeuroImage, 273, Article 120118. https://doi.org/10.1016/j.neuroimage.2023.120118

Joseph, J. V., Blaavand, M. S., Cai, H., Vernejoul, F., Knopper, R. W., Lindhardt, T. B., Skipper, K. A., Axelgaard, E., Reinert, L., Mikkelsen, J. G., Borghammer, P., Degn, S. E., Perouzel, E., Hager, H., Hansen, B., Kalucka, J. M., Vendelbo, M., Paludan, S. R. & Thomsen, M. K. (2023). STING activation counters glioblastoma by vascular alteration and immune surveillance. Cancer Letters, 579, Article 216480. https://doi.org/10.1016/j.canlet.2023.216480

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2023). Tensor denoising of multidimensional MRI data. Magnetic Resonance in Medicine, 89(3), 1160-1172. https://doi.org/10.1002/mrm.29478

Sandgaard, A. D., Shemesh, N., Jespersen, S. N. & Kiselev, V. G. (2023). To mask or not to mask? Investigating the impact of accounting for spatial frequency distributions and susceptibility sources on QSM quality. Magnetic Resonance in Medicine, 90(1), 353-362. https://doi.org/10.1002/mrm.29627

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2023). Towards microstructure-informed QSM: A digital phantom study. 1039. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2022). Alveolar bone measurements in magnetic resonance imaging compared with cone beam computed tomography: ex vivo study. Abstract from 18th European Congress of Dentomaxillofacial Radiology.

Alves, R., Henriques, R. N., Kerkelä, L., Chavarrías, C., Jespersen, S. N. & Shemesh, N. (2022). Correlation Tensor MRI deciphers underlying kurtosis sources in stroke. NeuroImage, 247, Article 118833. https://doi.org/10.1016/j.neuroimage.2021.118833

Spin-Neto, R., Kruse, C., Kirkevang, L.-L., Poulsen, L. H., Nixdorf, D. R., Hansen, B. & Wenzel, A. (2022). Diagnostic accuracy of magnetic resonance imaging and cone beam computed tomography for apical periodontitis assessment: ex vivo study. Abstract from 18th European Congress of DentoMaxilloFacial Radiology, Lublin, Poland.

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2022). Diffusion time dependence, power-law scaling, and exchange in gray matter. NeuroImage, 251, Article 118976. https://doi.org/10.1016/j.neuroimage.2022.118976

Khan, A. R., Hansen, B., Ardalan, M. & Raza, S. S. (2022). Editorial: Advances in the Imaging Techniques of Radiologically Subtle CNS Disorders. Frontiers in Neuroscience, 16, Article 1059705. https://doi.org/10.3389/fnins.2022.1059705

Jespersen, S. N. (2022). Editor's Choice: What does filter exchange imaging measure? NMR in Biomedicine, 35(12), Article e4829. https://doi.org/10.1002/nbm.4829

Mikkelsen, S. H., Wied, B., Dashkovskyi, V., Lindhardt, T. B., Hirschler, L., Warnking, J. M., Barbier, E. L., Postnov, D., Hansen, B. & Gutiérrez-Jiménez, E. (2022). Head holder and cranial window design for sequential magnetic resonance imaging and optical imaging in awake mice. Frontiers in Neuroscience, 16, Article 926828. https://doi.org/10.3389/fnins.2022.926828

Bertin, N., Knopper, R. W. & Hansen, B. (2022). Hjernens blå prik - centrum for hjernens sundhed? Aktuel Naturvidenskab, 2022(1), 36-41.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Incorporating Orientation-Dependent Susceptibility Effects in the Standard Model of Diffusion in White Matter. Abstract from ISMRM Workshop on Diffusion MRI
, Amsterdam, Netherlands.

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2022). Magnetic resonance imaging compared to cone beam computed tomography for jawbone measurements.

Johannsen, K. M., Fuglsig, J. M. D. C. E. S., Hansen, B., Matzen, L. H. & Spin-Neto, R. (2022). Magnetic resonance imaging in the diagnosis of periapical and periodontal disease: systematic review. Abstract from 18th European Congress of Dentomaxillofacial Radiology.

Lindhardt, T. B., Gutiérrez-Jiménez, E., Liang, Z. & Hansen, B. (2022). Male and Female C57BL/6 Mice Respond Differently to Awake Magnetic Resonance Imaging Habituation. Frontiers in Neuroscience, 16, Article 853527. https://doi.org/10.3389/fnins.2022.853527

Angleys, H. & Østergaard, L. (2022). Modeling the measurement bias in interstitial glucose concentrations derived from microdialysis in skeletal muscle. Physiological Reports, 10(8), Article e15252. https://doi.org/10.14814/phy2.15252

Ardalan, M., Chumak, T., Quist, A., Hermans, E., H.Rafati, A., Gravina, G., Marziyeh Jabbari Shiadeh, S., Svedin, P., Alabaf, S., Hansen, B., Wegener, G., Westberg, L. & Mallard, C. (2022). Reelin cells and sex-dependent synaptopathology in autism following postnatal immune activation. British Journal of Pharmacology, 179(17), 4400-4422. https://doi.org/10.1111/bph.15859

Johnsen, L., Friis, K. A., Ryø, L. B., Mikkelsen, J. G., Lindhardt, T. B., Knopper, R. W., Hansen, B., Praetorius, J. & Damkier, H. H. (2022). Regulation of Ncbe in the Choroid Plexus of Mice after Hemorrhage-Induced Hydrocephalus. The FASEB Journal, 36(S1). https://doi.org/10.1096/fasebj.2022.36.S1.R3405

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. (2022). Tensor denoising of high-dimensional MRI data.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). The Larmor Frequency of a White Matter Magnetic Microstructure Model with Multiple Sources. 2458. Abstract from Joint Annual Meeting ISMRM-ESMRMB
& ISMRT 31st Annual Meeting, London, United Kingdom.

Gu, T., Just, J., Stenz, K. T., Yan, Y., Sieljacks, P., Wang, J., Groennebaek, T. S., Jakobsgaard, J. E., Rindom, E., Herskind, J., Gravholt, A., Lassen, T. R., Jørgensen, M., Bæk, R., Gutiérrez-Jiménez, E., Iversen, N. K., Rasmussen, P. M., Nyengaard, J. R., Jørgensen, M. M. ... Drasbek, K. R. (2022). The Role of Plasma Extracellular Vesicles in Remote Ischemic Conditioning and Exercise-Induced Ischemic Tolerance. International Journal of Molecular Sciences , 23(6), Article 3334. https://doi.org/10.3390/ijms23063334

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Towards microstructure-informed QSM: A digital phantom study. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Lindhardt, T. B. & Hansen, B. (2021). Awake Mouse MRI of the Glymphatic System. Abstract from 2021 Minnesota Workshop on High and Ultra-high Field Imaging.

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2021). Beyond the diffusion standard model in fixed rat spinal cord with combined linear and planar encoding. NeuroImage, 231, Article 117849. https://doi.org/10.1016/j.neuroimage.2021.117849

Reinert, L. S., Rashidi, A. S., Tran, D. N., Katzilieris-Petras, G., Hvidt, A. K., Gohr, M., Fruhwürth, S., Bodda, C., Thomsen, M. K., Vendelbo, M. H., Khan, A. R., Hansen, B., Bergström, P., Agholme, L., Mogensen, T. H., Christensen, M. H., Nyengaard, J. R., Sen, G. C., Zetterberg, H. ... Paludan, S. R. (2021). Brain immune cells undergo cGAS/STING-dependent apoptosis during herpes simplex virus type 1 infection to limit type I IFN production. Journal of Clinical Investigation, 131(1), Article e136824. https://doi.org/10.1172/JCI136824

Koch, K. U., Mikkelsen, I. K., Espelund, U. S., Angleys, H., Tietze, A., Oettingen, G. V., Juul, N., Østergaard, L. & Rasmussen, M. (2021). Cerebral Macro- and Microcirculation during Ephedrine versus Phenylephrine Treatment in Anesthetized Brain Tumor Patients: A Randomized Clinical Trial Using Magnetic Resonance Imaging. Anesthesiology, 135(5), 788-803. https://doi.org/10.1097/ALN.0000000000003877

Henriques, R. N., Palombo, M., Jespersen, S. N., Shemesh, N., Lundell, H. & Ianuş, A. (2021). Double diffusion encoding and applications for biomedical imaging. Journal of Neuroscience Methods, 348, Article 108989. https://doi.org/10.1016/j.jneumeth.2020.108989

Fernandes, F., Gil, R., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Enhanced conventional and ultrafast responses in preclinical functional MRI using MP-PCA denoising. 2915. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2021). Evidence for microscopic kurtosis in neural tissue revealed by correlation tensor MRI. Magnetic Resonance in Medicine, 86(6), 3111-3130. https://doi.org/10.1002/mrm.28938

Thaler, C., Kyselyova, A. A., Faizy, T. D., Nawka, M. T., Jespersen, S., Hansen, B., Stellmann, J.-P., Heesen, C., Stürner, K. H., Stark, M., Fiehler, J., Bester, M. & Gellißen, S. (2021). Heterogeneity of multiple sclerosis lesions in fast diffusional kurtosis imaging. PLOS ONE, 16(2), Article e0245844. https://doi.org/10.1371/journal.pone.0245844

Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Intra-compartmental kurtosis biases tensor-valued multidimensional diffusion. 2463. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting. https://www.ismrm.org/21/program-files/TeaserSlides/TeasersPresentations/2463-Teaser.html

de Carvalho E Silva Fuglsig, J. M., Wenzel, A., Hansen, B., Lund, T. E. & Spin-Neto, R. (2021). Magnetic Resonance Imaging for the Planning, Execution, and Follow-up of Implant-Based Oral Rehabilitation: Systematic Review. International Journal of Oral & Maxillofacial Implants, 36(3), 432-441. https://doi.org/10.11607/jomi.8536

Næss-Schmidt, E. T., Udby Blicher, J., Møller Thastum, M., Rask, C. U., Wulff Svendsen, S., Schröder, A., Tuborgh, A. H., Østergaard, L., Sangill, R., Lund, T., Nørhøj Jespersen, S., Pedersen, A. R., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2021). Microstructural changes in the brain after long-term post-concussion symptoms: A randomized trial. Journal of Neuroscience Research, 99(3), 872-886. https://doi.org/10.1002/jnr.24773

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2021). MRI compared with CBCT for dental implant planning: a pilot, ex-vivo study on alveolar bone measurements. Abstract from 23rd International congress of dentomaxillofacial radiology, Korea, Republic of.

Johannsen, K. M., Fuglsig, J. M. D. C. E. S., Hansen, B., Lund, T. E., Wenzel, A. & Spin-Neto, R. (2021). MRI image artefacts caused by orthodontic appliances and/or implant-supported dental prosthesis: a systematic review. Abstract from
23rd International Congress of DentoMaxilloFacial Radiology (ICDMFR), Korea, Republic of.

Simoes, R., Henriques, R. N., Cardoso, B., Fernandes, F., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Non-invasive assessment of glycolytic and oxidative metabolism in mouse glioma using DGE 2H-MRS. 3718. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Olesen, J. L., Shemesh, N. & Jespersen, S. (2021). Power-law scaling of the diffusion signal in gray matter and the influence of exchange. 0643. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Vukovic, N., Hansen, B., Lund, T. E., Jespersen, S. & Shtyrov, Y. (2021). Rapid microstructural plasticity in the cortical semantic network following a short language learning session. PLoS Biology, 19(6), Article e3001290. https://doi.org/10.1371/journal.pbio.3001290

Alves, R., Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Resolving the underlying sources of diffusion kurtosis in focal ischemia by Correlation Tensor MRI. 0403. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Sandgaard, A. D., Kiselev, V., Shemesh, N. & Jespersen, S. (2021). Rotation-Free Mapping of Magnetic Tissue Properties in White Matter. 3967. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. N., Jones, D. K. & Veraart, J. (2021). Toward more robust and reproducible diffusion kurtosis imaging. Magnetic Resonance in Medicine, 86(3), 1600-1613. https://doi.org/10.1002/mrm.28730

Henriques, R. N., Jespersen, S., Jones, D. K. & Veraart, J. (2021). Towards more robust and reproducible Diffusion Kurtosis Imaging. 2464. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Trusbak Haumann, N., Hansen, B., Huotilainen, M., Vuust, P. & Brattico, E. (2020). Applying stochastic spike train theory for high-accuracy human MEG/EEG. Journal of Neuroscience Methods, 340, Article 108743. https://doi.org/10.1016/j.jneumeth.2020.108743

Henriques, R. N., Jespersen, S. & Shemesh, N. (2020). Correlation Tensor Imaging - resolving non-Gaussian diffusion sources of in vivo tissues. 0717. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2020). Correlation tensor magnetic resonance imaging. NeuroImage, 211, Article 116605. https://doi.org/10.1016/j.neuroimage.2020.116605

Lindhardt, T. B. & Hansen, B. (2020). Det er tid til at vågne op! Aktuel Naturvidenskab, 2(1). https://aktuelnaturvidenskab.dk/find-artikel/nyeste-numre/2-2020/hjerneforskning/

Hansen, B. (2020). Diffusion kurtosis imaging as a tool in neurotoxicology. Neurotoxicity Research, 37(1), 41-47. https://doi.org/10.1007/s12640-019-00100-3

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. N. (2020). Diffusion Kurtosis Imaging maps neural damage in the EAE model of multiple sclerosis. NeuroImage, 208, Article 116406. https://doi.org/10.1016/j.neuroimage.2019.116406

Simoes, R., Isturiz, J., Lynge Olesen, J., Jespersen, S. & Shemesh, N. (2020). Dynamic assessment of early metabolic perturbations in glioma-bearing mice using denoised 2H-MRS. 0475. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Angleys, H. & Østergaard, L. (2020). Krogh's capillary recruitment hypothesis, 100 years on: Is the opening of previously closed capillaries necessary to ensure muscle oxygenation during exercise? A J P: Heart and Circulatory Physiology (Online), 318(2), H425-H447. https://doi.org/10.1152/ajpheart.00384.2019

Henriques, R. N., Olesen, J. L., Jespersen, S. & Shemesh, N. (2020). Measuring the full diffusional intra- and inter-compartmental kurtosis tensors using double diffusion encoding. 0742. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Blackband, S. J., Flint, J., Hansen, B., Shepherd, T. M., Heon-Lee, C., Streit, W. J. & Forder, J. (2020). On the Origins of Diffusion MRI Signal Changes in Stroke. Frontiers in Neurology, 11, Article 549. https://doi.org/10.3389/fneur.2020.00549

Coelho, S., Pozo, J. M., Jespersen, S., Frangi, A. F., Novikov, D. S. & Fieremans, E. (2020). Optimal experimental design in multidimensional diffusion MRI for parameter estimation of biophysical tissue models. 0731. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Sandgaard, A. D. & Jespersen, S. (2020). Sharper Images in Quantitative Susceptibility Mapping with Magnetometric Dipole Kernels. 3197. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Lynge Olesen, J. & Jespersen, S. (2020). Stick power law scaling in neurons withstands realistic curvature and branching. 0716. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Dudele, A., Rasmussen, P. M. & Østergaard, L. (2020). Sural Nerve Perfusion in Mice. Frontiers in Neuroscience, 14, Article 579373. https://doi.org/10.3389/fnins.2020.579373

Lee, H.-H., Jespersen, S. N., Fieremans, E. & Novikov, D. S. (2020). The impact of realistic axonal shape on axon diameter estimation using diffusion MRI. NeuroImage, 223, Article 117228. https://doi.org/10.1016/j.neuroimage.2020.117228

Flint, J., Menon, K., Hansen, B., Forder, J. & Blackband, S. (2020). Visualization of Live, Mammalian Neurons During Kainate-Infusion Using Magnetic Resonance Microscopy. NeuroImage, 219, Article 116997. https://doi.org/10.1016/j.neuroimage.2020.116997

Hansen, B. (2019). An Introduction to Kurtosis Fractional Anisotropy. American Journal of Neuroradiology, 40(10), 1638-1641. https://doi.org/10.3174/ajnr.A6235

Rasmussen, P. M., Aamand, R., Weitzberg, E., Christiansen, M., Østergaard, L. & Lund, T. E. (2019). APOE gene-dependent BOLD responses to a breath-hold across the adult lifespan. NeuroImage: Clinical, 24, Article 101955. https://doi.org/10.1016/j.nicl.2019.101955

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Beyond the Standard Model in Spinal Cord. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Anzabi, M., Angleys, H., Aamand, R., Ardalan, M., Mouridsen, K., Rasmussen, P. M., Sørensen, J. C. H., Plesnila, N., Østergaard, L. & Iversen, N. K. (2019). Capillary flow disturbances after experimental subarachnoid hemorrhage: a contributor to delayed cerebral ischemia? Microcirculation, 26(3), Article e12516. https://doi.org/10.1111/micc.12516

Rasmussen, P. M., Aamand, R., Weitzberg, E., Christiansen, M., Østergaard, L. & Lund, T. E. (2019). Changes in dynamics of cerebrovascular reactivity responses to breath-hold in APOE e4 carriers across the adult lifespan. Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl), Article PB02-O10. https://doi.org/10.1177/0271678X19851020

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). Correlation Tensor Imaging (CTI): resolving diffusion sources of non-Gaussian diffusion. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. (2019). Diffusion Kurtosis Imaging (DKI) Biomarkers correlate with dysfunction in the EAE model of MS. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Næss-Schmidt, E., Blicher, J. U., Møller, M. T., Rask, C. U., Svendsen, S. W., Schröder, A., Tuborgh, A. H., Østergaard, L., Jespersen, S., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2019). Diffusion kurtosis imaging in patients with prolonged post-concussion symptoms. Journal of Psychosomatic Research, 121, 123. https://doi.org/10.1016/j.jpsychores.2019.03.073

Coelho, S., Pozo, J. M., Jespersen, S., Jones, D. K. & Frangi, A. F. (2019). Double diffusion encoding enables unique parameter estimation of the Standard Model in diffusion MRI. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Valette, J., Ronen, I. & Jespersen, S. N. (2019). Editorial: Assessing cellular microstructure in biological tissues using in vivo diffusion-weighted magnetic resonance. Frontiers in Physics, 7, Article 37. https://doi.org/10.3389/fphy.2019.00037

Jespersen, S., Fieremans, E. & Novikov, D. S. (2019). Effective medium theory of multiple diffusion encoding. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Jespersen, S., Lynge Olesen, J., Ianuş, A. & Shemesh, N. (2019). Effects of nongaussian diffusion on “isotropic diffusion“ measurements: an ex-vivo microimaging and simulation study. Journal of Magnetic Resonance, 300, 84-94. https://doi.org/10.1016/j.jmr.2019.01.007

Does, M. D., Olesen, J. L., Harkins, K. D., Serradas-Duarte, T., Gochberg, D. F., Jespersen, S. N. & Shemesh, N. (2019). Evaluation of principal component analysis image denoising on multi-exponential MRI relaxometry. Magnetic Resonance in Medicine, 81(6), 3503-3514. https://doi.org/10.1002/mrm.27658

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D. & Jespersen, S. (2019). Functional and microstructural alterations in the rat hippocampus after repetitive mild traumatic brain injury. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Aamand, R., Rasmussen, P. M., Weitzberg, E., Christiansen, M., Lund, T. E. & Østergaard, L. (2019). Local and global microvascular disturbances in the brains of APOE-ɛ4 carriers: Vascular and cognitive responses to nitrate supplementation. Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl), Article PB02-O12. https://doi.org/10.1177/0271678X19851020

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D., Østergaard, L. & Jespersen, S. (2019). Longitudinal, multiparametric MRI of repetitive mild traumatic brain injury in rats. 53-54. Abstract from Neuroscience Day 2019, Aarhus, Denmark.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2019). Microscopic anisotropy misestimation in spherical-mean single diffusion encoding MRI. Magnetic Resonance in Medicine, 81(5), 3245-3261. https://doi.org/10.1002/mrm.27606

Khan, A. R., Hansen, B., Danladi, J., Chuhutin, A., Wiborg, O., Nyengaard, J. R. & Jespersen, S. (2019). Neurite atrophy in dorsal hippocampus of rat indicates incomplete recovery of chronic mild stress induced depression: Neurite atrophy in the hippocampus show partial recovery of depression. NMR in Biomedicine, 32(3). https://doi.org/doi.org/10.1002/nbm.4057

Coelho, S., Pozo, J. M., Jespersen, S. N. & Frangi, A. F. (2019). Optimal Experimental Design for Biophysical Modelling in Multidimensional Diffusion MRI. In D. Shen, T. Liu, T. M. Peters, L. H. Staib, C. Essert, S. Zhou, P.-T. Yap & A. Khan (Eds.), Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings: Proceedings (Vol. III, pp. 617-625). Springer. https://doi.org/10.1007/978-3-030-32248-9_69

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Propagation of Bias in Moment-Matching Based Standard Model Parameter Estimation. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Novikov, D. S., Fieremans, E., Jespersen, S. N. & Kiselev, V. G. (2019). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation. NMR in Biomedicine, 32(4), Article e3998. https://doi.org/10.1002/nbm.3998

Doucette, J., Wei, L., Hernández-Torres, E., Kames, C., D. Forkert, N., Olesen, R. A., Lund, T. E., Hansen, B. & Rauscher, A. (2019). Rapid solution of the Bloch-Torrey equation in anisotropic tissue: Application to dynamic susceptibility contrast MRI of cerebral white matter. NeuroImage, 185, 198-207. https://doi.org/10.1016/j.neuroimage.2018.10.035

Coelho, S., Pozo, J. M., Jespersen, S. N., Jones, D. K. & Frangi, A. F. (2019). Resolving degeneracy in diffusion MRI biophysical model parameter estimation using double diffusion encoding. Magnetic Resonance in Medicine, 82(1), 395-410. https://doi.org/10.1002/mrm.27714

Gutiérrez-Jiménez, E., Fruekilde, S., Rasmussen, P. M., Mikkelsen, I. K., Iversen, N. K., Bordoni, L., Fossati, S., Ramos-Cejudo, J., Sakadzic, S. & Østergaard, L. (2019). The effect of carbonic anhydrase inhibitors in brain microcirculation of the Tg-SwDI model of Alzheimer's disease. Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl), Article PB02-O02. https://doi.org/10.1177/0271678X19851020

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). The two-compartment diffusion “standard model” misestimates microscopic anisotropy in-vivo. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Ianuş, A., Jespersen, S. N., Serradas Duarte, T., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2018). Accurate estimation of microscopic diffusion anisotropy and its time dependence in the mouse brain. NeuroImage, 183, 934-949. https://doi.org/10.1016/j.neuroimage.2018.08.034

Ianus, A., Jespersen, S., Drobjnak, I. & Shemesh, N. (2018). Accurate Estimation of Microscopic Diffusion Anisotropy Using Multi-shell Double Diffusion Encoding. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Qvist, P., Eskildsen, S. F., Hansen, B., Baragji, M., Ringgaard, S., Roovers, J., Paternoster, V., Molgaard, S., Corydon, T. J., Stødkilde-Jørgensen, H., Glerup, S., Mors, O., Wegener, G., Nyengaard, J. R., Børglum, A. D. & Christensen, J. H. (2018). Brain volumetric alterations accompanied with loss of striatal medium-sized spiny neurons and cortical parvalbumin expressing interneurons in Brd1+/- mice. Scientific Reports, 8(1), 16486. Article 16486. https://doi.org/10.1038/s41598-018-34729-5

Khan, A. R., Kroenke, C. D., Wiborg, O., Chuhutin, A., Nyengaard, J. R., Hansen, B. & Jespersen, S. (2018). Differential microstructural alterations in rat cerebral cortex in a model of chronic mild stress depression. PLOS ONE, 13(2), e0192329. Article https://doi.org/10.1371/journal.pone.0192329. https://doi.org/10.1371/journal.pone.0192329

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. D. & Jespersen, S. (2018). Diffusion MRI and MR spectroscopy reveal microstructural and metabolic brain alterations in chronic mild stress exposed rats: A CMS recovery study. NeuroImage, 167, 342-353. https://doi.org/10.1016/j.neuroimage.2017.11.053

Næss-Schmidt, E. T., Blicher, J. U., Tietze, A., Rask, C. U., Svendsen, S. W., Schröder, A., Thastum, M. M., Tuborgh, A. H., Frederiksen, O.-V., Østergaard, L., Eskildsen, S. F., Hansen, B., Jespersen, S. & Nielsen, J. F. (2018). Diffusion MRI findings in patients with extensive and minimal post-concussion symptoms after mTBI and healthy controls - a cross sectional study. Brain Injury, 32(1), 91-98. https://doi.org/10.1080/02699052.2017.1377352

Jespersen, S. N., Olesen, J. L., Hansen, B. & Shemesh, N. (2018). Diffusion time dependence of microstructural parameters in fixed spinal cord. NeuroImage, 182, 329-342. https://doi.org/10.1016/j.neuroimage.2017.08.039

Gutierrez-Jimenez, E., Angleys, H., Rasmussen, P. M., West, M. J., Catalini, L., Iversen, N. K., Jensen, M. S., Frische, S. & Ostergaard, L. (2018). Disturbances in the control of capillary flow in an aged APP(swe)/PS1 Delta E9 model of Alzheimer's disease. Neurobiology of Aging, 62, 82-94. https://doi.org/10.1016/j.neurobiolaging.2017.10.006

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). Evaluation of Marchenko-Pastur PCA denoising on Multi-Exponential Relaxometry. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). EVALUATION OF PCA DENOISING OF MRI RELAXOMETRY DATA. In Proceedings of 2018 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2018)

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. (2018). Ex-vivo diffusion MRI reveals microstructural alterations in stress-sensitive brain regions: A chronic mild stress recovery study. Abstract from Joint ISMRM and ESMRMB conference, Paris, Paris, France.

Anzabi, M., Ardalan, M., Iversen, N. K., H. Rafati, A., Hansen, B. & Østergaard, L. (2018). Hippocampal Atrophy Following Subarachnoid Hemorrhage Correlates with Disruption of Astrocyte Morphology and Capillary Coverage by AQP4. Frontiers in Cellular Neuroscience, 12(19), Article 19.

Jespersen, S., Olesen, J. L., Ianus, A. & Shemesh, N. (2018). Implications of nongaussian diffusion on the interpretation of multidimensional diffusion measurements. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Khan, A. R., Hansen, B., Iversen, N. K., Angoa-Perez, M., Kuhn, D. & Jespersen, S. (2018). Longitudinal metabolic alterations in the cerebral cortex of rats after repetitive mild traumatic brain injury. 1.

Khan, A. R., Jespersen, S., Wiborg, O., Kroenke, C. & Hansen, B. (2018). Microstructural and Metabolic Recovery of Anhedonic Rat Brains: An In Vivo Diffusion MRI and 1H-MRS Approach. Data, 3(3), Article 29. https://doi.org/10.3390/data3030029

Rasmussen, P. M., Secomb, T. W. & Pries, A. R. (2018). Modeling the hematocrit distribution in microcirculatory networks: A quantitative evaluation of a phase separation model: A quantitative evaluation of a phase separation model. Microcirculation, 25(3), Article 12445. https://doi.org/10.1111/micc.12445

Novikov, D. S., Kiselev, V. & Jespersen, S. (2018). On modeling. Magnetic Resonance in Medicine, 79(6), 3172– 3193. https://doi.org/10.1002/mrm.27101

Bay, V., Kjølby, B. F., Iversen, N. K., Mikkelsen, I. K., Ardalan, M., Nyengaard, J. R., Jespersen, S. N., Drasbek, K. R., Østergaard, L. & Hansen, B. (2018). Stroke infarct volume estimation in fixed tissue: Comparison of diffusion kurtosis imaging to diffusion weighted imaging and histology in a rodent MCAO model. PLOS ONE, 13(4), e0196161. Article e0196161. https://doi.org/10.1371/journal.pone.0196161

Angleys, H., Jespersen, S. & Østergaard, L. (2018). The effects of capillary transit time heterogeneity (CTH) on the BOLD signal. Human Brain Mapping, 39(6), 2329-2352. https://doi.org/10.1002/hbm.23991

Gutiérrez-Jiménez, E., Angleys, H., Rasmussen, P. M., Mikkelsen, I. K., Mouridsen, K. & Østergaard, L. (2018). The effects of hypercapnia on cortical capillary transit time heterogeneity (CTH) in anesthetized mice. Journal of Cerebral Blood Flow and Metabolism, 38(2), 290-303. Article 271678X17692598. https://doi.org/10.1177/0271678X17692598

Engedal, T. S., Hjort, N., Hougaard, K. D., Simonsen, C. Z., Andersen, G., Mikkelsen, I. K., Boldsen, J. K., Eskildsen, S. F., Hansen, M. B., Angleys, H., Jespersen, S. N., Pedraza, S., Cho, T.-H., Serena, J., Siemonsen, S., Thomalla, G., Nighoghossian, N., Fiehler, J., Mouridsen, K. & Østergaard, L. (2018). Transit time homogenization in ischemic stroke - A novel biomarker of penumbral microvascular failure? Journal of Cerebral Blood Flow and Metabolism, 38(11), 2006-2020. https://doi.org/10.1177/0271678X17721666

Jespersen, S. (2018). White matter biomarkers from diffusion MRI. Journal of Magnetic Resonance, 291, 127-140. https://doi.org/10.1016/j.jmr.2018.03.001

Jespersen, S. N., Olesen, J. L., Ianuş, A. & Shemesh, N. (2017). Anisotropy in "isotropic diffusion" measurements due to nongaussian diffusion. http://arxiv.org/abs/1712.02290

Nielsen, R. B., Egefjord, L., Angleys, H., Mouridsen, K., Gejl, M., Møller, A., Brock, B., Brændgaard, H., Gottrup, H., Rungby, J., Eskildsen, S. F. & Østergaard, L. (2017). Capillary dysfunction is associated with symptom severity and neurodegeneration in Alzheimer's disease. Alzheimer's & Dementia, 13(10), 1143-1153. https://doi.org/10.1016/j.jalz.2017.02.007

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Nielsen, R. B., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Lund, T. E., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2017). Increased cortical capillary transit time heterogeneity in Alzheimer’s disease: a DSC-MRI perfusion study. Neurobiology of Aging, 50, 107-118. https://doi.org/10.1016/j.neurobiolaging.2016.11.004

Alstrup, A. K. O., Munk, O. L., Jensen, T. H., Jensen, L. F., Hedayat, A. & Hansen, B. (2017). Magnetic resonance imaging and computed tomography as tools for the investigation of sperm whale (Physeter macrocephalus) teeth and eye. Acta Veterinaria Scandinavica , 59(1), 1-8. Article 38. https://doi.org/10.1186/s13028-017-0307-y

Nunes, D., Cruz, T. L., Jespersen, S. N. & Shemesh, N. (2017). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. Journal of Magnetic Resonance, 277, 117. https://doi.org/10.1016/j.jmr.2017.02.017

Flint, J., Menon, K., Hansen, B., Forder, J. & Blackband, S. (2017). Metabolic Support of Excised, Living Brain Tissues During Magnetic Resonance Microscopy Acquisition. Journal of Visualized Experiments, 2017(128), Article e56282.

Næss-Schmidt, E. T., Blicher, J. U., Eskildsen, S. F., Tietze, A., Hansen, B., Stubbs, P. W., Jespersen, S., Østergaard, L. & Nielsen, J. F. (2017). Microstructural changes in the thalamus after mild traumatic brain injury: A longitudinal diffusion and mean kurtosis tensor MRI study. Brain Injury, 31(2), 230-236. https://doi.org/10.1080/02699052.2016.1229034

Rasmussen, P. M., Smith, A. F., Sakadžić, S., Boas, D. A., Pries, A. R., Secomb, T. W. & Østergaard, L. (2017). Model-based inference from microvascular measurements: Combining experimental measurements and model predictions using a Bayesian probabilistic approach. Microcirculation, 24(4), Article e12343. https://doi.org/10.1111/micc.12343

Chuhutin, A., Hansen, B. & Jespersen, S. N. (2017). Precision and accuracy of diffusion kurtosis estimation and the influence of b-value selection. NMR in Biomedicine, 30(11), Article e3777. https://doi.org/10.1002/nbm.3777

Hansen, B. & Jespersen, S. (2017). Recent developments in fast kurtosis imaging. Frontiers in Physics, 5(SEP), Article 40. https://doi.org/10.3389/fphy.2017.00040

Garza-Villarreal, E. A., Chakravarty, M. M., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2017). The effect of crack cocaine addiction and age on the microstructure and morphology of the human striatum and thalamus using shape analysis and fast diffusion kurtosis imaging. Translational Psychiatry, 7(5), Article 1122. https://doi.org/10.1038/tp.2017.92

Lynge Olesen, J., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time dependence of kurtosis and intra-and extra-axonal diffusivity using axisymmetric diffusion kurtosis imaging. Poster session presented at ISMRM Workshop on Quantitative MRI in White Matter Disorders: Useful, Usable, Used?, Vancouver, Canada.

Ianus, A., Jespersen, S. N., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2017). Time Dependence of Microscopic Anisotropy in the Mouse Brain Measured with Double Oscillating Diffusion Encoding (DODE) MRI. In Proceedings of ISMRM 25th Annual Meeting (Vol. 25, pp. 0277)

Olesen, J. L., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time Dependence of White Matter Biomarkers from Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 0841)

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Eskildsen, S. F., Østergaard, L. & Jespersen, S. N. (2017). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging. NMR in Biomedicine, 30(9), Article e3741. https://doi.org/10.1002/nbm.3741

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2017). White Matter Biomarkers from Fast Protocols Using Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 1742)

Lasic, S., Jespersen, S. N., Lundell, H., Nilsson, M., Dyrby, T. & Topgaard, D. (2016). Apparent Exchange Rate in Multi-Compartment Anisotropic Tissue. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Biophysical modeling of high field diffusion MRI demonstrates micro-structural aberration in chronic mild stress rat brain. NeuroImage, 142, 421-430. https://doi.org/10.1016/j.neuroimage.2016.07.001

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2016). Capillary dysfunction in Alzheimer’s disease correlates with cognitive decline. Abstract from 10th FENS FORUM of Neuroscience 2016, København, Denmark.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Chronic Mild Stress Induces Changes in Neurite Density in the Amygdala as Revealed by Diffusion MRI and Validated with Novel Histological Analyses. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Skakkebæk, A., Gravholt, C. H., Rasmussen, P. M., Bojesen, A., Jensen, J. S., Fedder, J., Laurberg, P., Hertz, J. M., Østergaard, J. R., Pedersen, A. D. & Wallentin, M. (2016). Corrigendum to "Neuroanatomical correlates of Klinefelter syndrome studied in relation to the neuropsychological profile" [NeuroImage:Clin 4 (2014) 1-9]. NeuroImage: Clinical, 11, 52. https://doi.org/10.1016/j.nicl.2016.01.005

Hansen, B. & Jespersen, S. N. (2016). Data for evaluation of fast kurtosis imaging, b-value optimization and exploration of diffusion MRI contrast. Scientific Data, 3, Article 160072. https://doi.org/10.1038/sdata.2016.72

Flint, J. J., Hansen, B. & Blackband, S. J. (2016). Diffusion tensor microscopy data (15.6µm in-plane) of white matter tracts in the human, pig, and rat spinal cord with corresponding tissue histology. Data in Brief.

Gutiérrez-Jiménez, E., Cai, C., Mikkelsen, I. K., Rasmussen, P. M., Angleys, H., Merrild, M., Mouridsen, K., Jespersen, S. N., Lee, J., Iversen, N. K., Sakadzic, S. & Østergaard, L. (2016). Effect of electrical forepaw stimulation on capillary transit-time heterogeneity (CTH). Journal of Cerebral Blood Flow and Metabolism, 36(12), 2072-2086. https://doi.org/10.1177/0271678X16631560

Kjølby, B. F., Khan, A. R., Chuhutin, A., Pedersen, L. H., Jensen, J. B., Jakobsen, S., Zeidler, D., Sangill, R., Nyengaard, J. R., Jespersen, S. N. & Hansen, B. (2016). Fast diffusion kurtosis imaging of fibrotic mouse kidneys. NMR in Biomedicine, 29(12), 1709.

Hansen, B., Shemesh, N. & Jespersen, S. N. (2016). Fast imaging of mean, axial and radial diffusion kurtosis. NeuroImage, 142, 381. https://doi.org/10.1016/j.neuroimage.2016.08.022

Hansen, B. & Jespersen, S. N. (2016). Kurtosis fractional anisotropy: its contrast and estimation by proxy. Scientific Reports, 6(23999), Article 23999.

Nunes, D., Cruz, T. L., Jespersen, S. & Shemesh, N. (2016). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. arXiv.

Novikov, D. S., Jespersen, S. N., Kiselev, V. G. & Fieremans, E. (2016). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Summary of high field diffusion MRI and microscopy data demonstrate microstructural aberration in chronic mild stress rat brain. Data in Brief, 8, 934-937. https://doi.org/10.1016/j.dib.2016.06.061

Nunes, D., Cruz, T., Jespersen, S. N. & Shemesh, N. (2016). Susceptibility-Driven Oscillations in Multi-Gradient-Echo MRI Reflect Axonal Microstructures. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Garza-Villarreal, E. A., Mallar, C., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2016). The effect of crack cocaine addiction on the microstructure and morphology of the human striatum and thalamus using novel shape analysis and fast diffusion kurtosis imaging. (066647 ed.) https://doi.org/10.1101/066647

Angleys, H., Jespersen, S. & Østergaard, L. (2016). The effects of capillary transit time heterogeneity (CTH) on the cerebral uptake of glucose and glucose analogs: Application to FDG and comparison to oxygen uptake. Frontiers in Computational Neuroscience, 10(OCT), Article 103. https://doi.org/10.3389/fncom.2016.00103

Chuhutin, A., Shemesh, N., Hansen, B. & Jespersen, S. N. (2016). The Importance of B-Values Selection and the Precision of Diffusion Kurtosis Estimation by the Conventional Schemes. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Jespersen, S. N., Hansen, B., Nunes, D. & Shemesh, N. (2016). Time Dependence of Diffusion and Kurtosis Parameters in the Rat Spinal Cord. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2016). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging.

Khan, A. R., Cornea, A., Leigland, L. A., Kohama, S. G., Jespersen, S. N. & Kroenke, C. D. (2015). 3D structure tensor analysis of light microscopy data for validating diffusion MRI. NeuroImage, 111, 192-203. https://doi.org/10.1016/j.neuroimage.2015.01.061

Flint, J., Menon, K., Hansen, B., Forder, J. & Blackband, S. (2015). A Microperfusion and In-Bore Oxygenator System Designed for Magnetic Resonance Microscopy Studies on Living Tissue Explants. Scientific Reports, 5(18095).

Khan, A. R., Chuhutin, A., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. N. (2015). Biophysical Modeling of High Field Diffusion MRI Demonstrates Micro-Structural Aberration in Chronic Mild Stress (CMS) Rat Brain. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Østergaard, L., Jespersen, S. N., Engedal, T. S., Jiménez, E. G., Ashkanian, M., Hansen, M. B., Eskildsen, S. & Mouridsen, K. (2015). Capillary dysfunction: Its detection and causative role in dementias and stroke. Current Neurology and Neuroscience Reports, 15(6), 37. https://doi.org/10.1007/s11910-015-0557-x

Flint, J., Hansen, B. & Blackband, S. (2015). Cellular-level investigation of a diffusion time dependent contrast enhancement technique for oncological imaging. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Shemesh, N., Jespersen, S. N., Alexander, D. C., Cohen, Y., Drobnjak, I., Dyrby, T. B., Finsterbusch, J., Koch, M. A., Kuder, T., Laun, F., Lawrenz, M., Lundell, H., Mitra, P. P., Nilsson, M., Özarslan, E., Topgaard, D. & Westin, C.-F. (2015). Conventions and nomenclature for double diffusion encoding NMR and MRI. Magnetic Resonance in Medicine, 75(1), 82-87. https://doi.org/10.1002/mrm.25901

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2015). Cortical capillary dysfunction in patients suspected of Alzheimer’s disease. Abstract from The Alzheimer's Association International Conference 2015, Washington D.C., United States. https://doi.org/10.1016/j.jalz.2015.06.1767

Kjølby, B. F., Jakobsen, S., Jensen, J., Pedersen, L. H., Rydtoft, L. M., Jespersen, S. N. & Hansen, B. (2015). Diffusion Kurtosis Imaging of Fibrotic Mouse Kidneys. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Haack, S., Tanderup, K., Kallehauge, J. F., Mohamed, S. M. I., Lindegaard, J. C., Pedersen, E. M. & Jespersen, S. N. (2015). Diffusion-weighted magnetic resonance imaging during radiotherapy of locally advanced cervical cancer - treatment response assessment using different segmentation methods. Acta Oncologica, 54(9), 1535-1542. https://doi.org/10.3109/0284186X.2015.1062545, https://doi.org/10.3109/0284186X.2015.1062545

Hansen, B., Lund, T. E., Sangill, R., Stubbe, E., Finsterbusch, J. & Jespersen, S. N. (2015). Experimental considerations for fast kurtosis imaging. Magnetic Resonance in Medicine, 76, 1455-1468. https://doi.org/10.1002/mrm.26055

Lee, C. H., Flint, J., Hansen, B. & Blackband, S. (2015). Investigation of the subcellular architecture of L7 neurons of Aplysia californica using magnetic resonance microscopy (MRM) at 7.8 microns. Scientific Reports.

Tietze, A., Hansen, M. B., Østergaard, L., Jespersen, S. N., Sangill, R., Lund, T. E., Geneser, M., Hjelm, M. & Hansen, B. (2015). Mean Diffusional Kurtosis in Patients with Glioma: Initial Results with a Fast Imaging Method in a Clinical Setting. American Journal of Neuroradiology, 36(8), 1472-1478. https://doi.org/10.3174/ajnr.A4311

Østergaard, L., Granfeldt, A., Secher, N., Tietze, A., Iversen, N. K., Jensen, M. S., Andersen, K. K., Nagenthiraja, K., Gutiérrez-Lizardi, P., Mouridsen, K., Jespersen, S. N. & Tønnesen, E. K. (2015). Microcirculatory dysfunction and tissue oxygenation in critical illness. Acta Anaesthesiologica Scandinavica, 59(10), 1246-59. https://doi.org/10.1111/aas.12581

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2015). Neurite density from an isotropic diffusion model.

Østergaard, L., Dreier, J. P., Hadjikhani, N., Jespersen, S. N., Dirnagl, U. & Dalkara, T. (2015). Neurovascular coupling during cortical spreading depolarization and -depression. Stroke; a journal of cerebral circulation, 46(5), 1392-401. https://doi.org/10.1161/STROKEAHA.114.008077

Østergaard, L., Finnerup, N. B., Terkelsen, A. J., Olesen, R. A., Drasbek, K. R., Knudsen, L., Jespersen, S. N., Frystyk, J., Charles, M., Thomsen, R. W., Christiansen, J. S., Beck-Nielsen, H., Jensen, T. S. & Andersen, H. (2015). The effects of capillary dysfunction on oxygen and glucose extraction in diabetic neuropathy. Diabetologia, 58(4), 666-677. https://doi.org/10.1007/s00125-014-3461-z

Angleys, H., Østergaard, L. & Jespersen, S. N. (2015). The effects of capillary transit time heterogeneity (CTH) on brain oxygenation. Journal of Cerebral Blood Flow and Metabolism, 35(5), 806-17. https://doi.org/10.1038/jcbfm.2014.254

Rasmussen, P. M., Jespersen, S. N. & Ostergaard, L. (2015). The effects of transit time heterogeneity on brain oxygenation during rest and functional activation. Journal of Cerebral Blood Flow and Metabolism, 35(3), 432-42. https://doi.org/10.1038/jcbfm.2014.213

Chuhutin, A., Khan, A. R., Hansen, B. & Jespersen, S. N. (2015). The Mean Kurtosis Evaluation Measurements Show a Considerable Disparity from the Analytically Evaluated Ones for a Clinically Used Range of B-Values. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Lundell, H., Dyrby, T., Hubbard Cristinacce, P., Zhou, F.-L., Parker, G. & Jespersen, S. N. (2015). Validation of Double Diffusion Schemes of Microscopic Fractional Anisotropy. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Khan, A. R., Leigland, L., Kohama, S., Cornea, A., Jespersen, S. N. & Kroenke, C. (2014). 3D Structure Tensor Analysis of Light Microscopy Data for Validating Diffusion MRI. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2014). A Fast and Robust Method for Simultaneous Estimation of Mean Diffusivity and Mean Tensor Kurtosis. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Næss-Schmidt, E., Blicher, J., Tietze, A., Eskildsen, S. F., Hansen, B., Lund, T. E., Østergaard, L. & Nielsen, J. F. (2014). Biomarkers in the brain after mTBI: A multimodal MRI study. Poster session presented at 8th World Congress for NeuroRehabilitation, Istanbul, Turkey.