Publications

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Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2023). Tensor denoising of multidimensional MRI data. Magnetic Resonance in Medicine, 89(3), 1160-1172. https://doi.org/10.1002/mrm.29478

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2022). Alveolar bone measurements in magnetic resonance imaging compared with cone beam computed tomography: ex vivo study. Abstract from 18th European Congress of Dentomaxillofacial Radiology.

Alves, R., Henriques, R. N., Kerkelä, L., Chavarrías, C., Jespersen, S. N. & Shemesh, N. (2022). Correlation Tensor MRI deciphers underlying kurtosis sources in stroke. NeuroImage, 247, [118833]. https://doi.org/10.1016/j.neuroimage.2021.118833

Spin-Neto, R., Kruse, C., Kirkevang, L-L., Poulsen, L. H., Nixdorf, D. R., Hansen, B. & Wenzel, A. (2022). Diagnostic accuracy of magnetic resonance imaging and cone beam computed tomography for apical periodontitis assessment: ex vivo study. Abstract from 18th European Congress of DentoMaxilloFacial Radiology, Lublin, Poland.

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2022). Diffusion time dependence, power-law scaling, and exchange in gray matter. NeuroImage, 251, [118976]. https://doi.org/10.1016/j.neuroimage.2022.118976

Jespersen, S. N. (2022). Editor's Choice: What does filter exchange imaging measure? NMR in Biomedicine, 35(12), [e4829]. https://doi.org/10.1002/nbm.4829

Khan, A. R., Hansen, B., Ardalan, M. & Raza, S. S. (2022). Editorial: Advances in the Imaging Techniques of Radiologically Subtle CNS Disorders. Frontiers in Neuroscience, 16, [1059705]. https://doi.org/10.3389/fnins.2022.1059705

Mikkelsen, S. H., Wied, B., Dashkovskyi, V., Lindhardt, T. B., Hirschler, L., Warnking, J. M., Barbier, E. L., Postnov, D., Hansen, B. & Gutiérrez-Jiménez, E. (2022). Head holder and cranial window design for sequential magnetic resonance imaging and optical imaging in awake mice. Frontiers in Neuroscience, 16, [926828]. https://doi.org/10.3389/fnins.2022.926828

Bertin, N., Knopper, R. W. & Hansen, B. (2022). Hjernens blå prik - centrum for hjernens sundhed? Aktuel Naturvidenskab, 2022(1), 36-41.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Incorporating susceptibility effects into the standard model of diffusion in white matter. Abstract from ISMRM Workshop on Diffusion MRI
, Amsterdam, Netherlands.

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2022). Magnetic resonance imaging compared to cone beam computed tomography for jawbone measurements.

Johannsen, K. M., Fuglsig, J. M. D. C. E. S., Hansen, B., Matzen, L. H. & Spin-Neto, R. (2022). Magnetic resonance imaging in the diagnosis of periapical and periodontal disease: systematic review. Abstract from 18th European Congress of Dentomaxillofacial Radiology.

Lindhardt, T. B., Gutiérrez-Jiménez, E., Liang, Z. & Hansen, B. (2022). Male and Female C57BL/6 Mice Respond Differently to Awake Magnetic Resonance Imaging Habituation. Frontiers in Neuroscience, 16, [853527]. https://doi.org/10.3389/fnins.2022.853527

Angleys, H. & Østergaard, L. (2022). Modeling the measurement bias in interstitial glucose concentrations derived from microdialysis in skeletal muscle. Physiological Reports, 10(8), [e15252]. https://doi.org/10.14814/phy2.15252

Ardalan, M., Chumak, T., Quist, A., Hermans, E., H.Rafati, A., Gravina, G., Marziyeh Jabbari Shiadeh, S., Svedin, P., Alabaf, S., Hansen, B., Wegener, G., Westberg, L. & Mallard, C. (2022). Reelin cells and sex-dependent synaptopathology in autism following postnatal immune activation. British Journal of Pharmacology, 179(17), 4400-4422. https://doi.org/10.1111/bph.15859

Johnsen, L., Friis, K. A., Ryø, L. B., Mikkelsen, J. G., Lindhardt, T. B., Knopper, R. W., Hansen, B., Praetorius, J. & Damkier, H. H. (2022). Regulation of Ncbe in the Choroid Plexus of Mice after Hemorrhage-Induced Hydrocephalus. The FASEB Journal, 36(S1). https://doi.org/10.1096/fasebj.2022.36.S1.R3405

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. (2022). Tensor denoising of high-dimensional MRI data.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). The Larmor Frequency of a White Matter Magnetic Microstructure Model with Multiple Sources. 2458. Abstract from Joint Annual Meeting ISMRM-ESMRMB
& ISMRT 31st Annual Meeting, London, United Kingdom.

Gu, T., Just, J., Stenz, K. T., Yan, Y., Sieljacks, P., Wang, J., Groennebaek, T. S., Jakobsgaard, J. E., Rindom, E., Herskind, J., Gravholt, A., Lassen, T. R., Jørgensen, M., Bæk, R., Gutiérrez-Jiménez, E., Iversen, N. K., Rasmussen, P. M., Nyengaard, J. R., Jørgensen, M. M. ... Drasbek, K. R. (2022). The Role of Plasma Extracellular Vesicles in Remote Ischemic Conditioning and Exercise-Induced Ischemic Tolerance. International Journal of Molecular Sciences , 23(6), [3334]. https://doi.org/10.3390/ijms23063334

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Towards microstructure-informed QSM: A digital phantom study. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Lindhardt, T. B. & Hansen, B. (2021). Awake Mouse MRI of the Glymphatic System. Abstract from 2021 Minnesota Workshop on High and Ultra-high Field Imaging.

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2021). Beyond the diffusion standard model in fixed rat spinal cord with combined linear and planar encoding. NeuroImage, 231, [117849]. https://doi.org/10.1016/j.neuroimage.2021.117849

Reinert, L. S., Rashidi, A. S., Tran, D. N., Katzilieris-Petras, G., Hvidt, A. K., Gohr, M., Fruhwürth, S., Bodda, C., Thomsen, M. K., Vendelbo, M. H., Khan, A. R., Hansen, B., Bergström, P., Agholme, L., Mogensen, T. H., Christensen, M. H., Nyengaard, J. R., Sen, G. C., Zetterberg, H. ... Paludan, S. R. (2021). Brain immune cells undergo cGAS/STING-dependent apoptosis during herpes simplex virus type 1 infection to limit type I IFN production. Journal of Clinical Investigation, 131(1), [e136824]. https://doi.org/10.1172/JCI136824

Koch, K. U., Mikkelsen, I. K., Espelund, U. S., Angleys, H., Tietze, A., Oettingen, G. V., Juul, N., Østergaard, L. & Rasmussen, M. (2021). Cerebral Macro- and Microcirculation during Ephedrine versus Phenylephrine Treatment in Anesthetized Brain Tumor Patients: A Randomized Clinical Trial Using Magnetic Resonance Imaging. Anesthesiology, 135(5), 788-803. https://doi.org/10.1097/ALN.0000000000003877

Henriques, R. N., Palombo, M., Jespersen, S. N., Shemesh, N., Lundell, H. & Ianuş, A. (2021). Double diffusion encoding and applications for biomedical imaging. Journal of Neuroscience Methods, 348, [108989]. https://doi.org/10.1016/j.jneumeth.2020.108989

Fernandes, F., Gil, R., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Enhanced conventional and ultrafast responses in preclinical functional MRI using MP-PCA denoising. 2915. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2021). Evidence for microscopic kurtosis in neural tissue revealed by correlation tensor MRI. Magnetic Resonance in Medicine, 86(6), 3111-3130. https://doi.org/10.1002/mrm.28938

Thaler, C., Kyselyova, A. A., Faizy, T. D., Nawka, M. T., Jespersen, S., Hansen, B., Stellmann, J-P., Heesen, C., Stürner, K. H., Stark, M., Fiehler, J., Bester, M. & Gellißen, S. (2021). Heterogeneity of multiple sclerosis lesions in fast diffusional kurtosis imaging. PLOS ONE, 16(2), [e0245844]. https://doi.org/10.1371/journal.pone.0245844

Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Intra-compartmental kurtosis biases tensor-valued multidimensional diffusion. 2463. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting. https://www.ismrm.org/21/program-files/TeaserSlides/TeasersPresentations/2463-Teaser.html

Fuglsig, J. M. D. C. E. S., Hansen, B., Schropp, L., Nixdorf, D. R., Wenzel, A. & Spin-Neto, R. (2021). MRI compared with CBCT for dental implant planning: a pilot, ex-vivo study on alveolar bone measurements. Abstract from 23rd International congress of dentomaxillofacial radiology, Korea, Republic of.

Johannsen, K. M., Fuglsig, J. M. D. C. E. S., Hansen, B., Lund, T. E., Wenzel, A. & Spin-Neto, R. (2021). MRI image artefacts caused by orthodontic appliances and/or implant-supported dental prosthesis: a systematic review. Abstract from
23rd International Congress of DentoMaxilloFacial Radiology (ICDMFR), Korea, Republic of.

de Carvalho E Silva Fuglsig, J. M., Wenzel, A., Hansen, B., Lund, T. E. & Spin-Neto, R. (2021). Magnetic Resonance Imaging for the Planning, Execution, and Follow-up of Implant-Based Oral Rehabilitation: Systematic Review. International Journal of Oral & Maxillofacial Implants, 36(3), 432-441. https://doi.org/10.11607/jomi.8536

Næss-Schmidt, E. T., Udby Blicher, J., Møller Thastum, M., Rask, C. U., Wulff Svendsen, S., Schröder, A., Tuborgh, A. H., Østergaard, L., Sangill, R., Lund, T., Nørhøj Jespersen, S., Pedersen, A. R., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2021). Microstructural changes in the brain after long-term post-concussion symptoms: A randomized trial. Journal of Neuroscience Research, 99(3), 872-886. https://doi.org/10.1002/jnr.24773

Simoes, R., Henriques, R. N., Cardoso, B., Fernandes, F., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Non-invasive assessment of glycolytic and oxidative metabolism in mouse glioma using DGE 2H-MRS. 3718. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Olesen, J. L., Shemesh, N. & Jespersen, S. (2021). Power-law scaling of the diffusion signal in gray matter and the influence of exchange. 0643. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Vukovic, N., Hansen, B., Lund, T. E., Jespersen, S. & Shtyrov, Y. (2021). Rapid microstructural plasticity in the cortical semantic network following a short language learning session. PLoS Biology, 19(6), [e3001290]. https://doi.org/10.1371/journal.pbio.3001290

Alves, R., Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Resolving the underlying sources of diffusion kurtosis in focal ischemia by Correlation Tensor MRI. 0403. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Sandgaard, A. D., Kiselev, V., Shemesh, N. & Jespersen, S. (2021). Rotation-Free Mapping of Magnetic Tissue Properties in White Matter. 3967. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. N., Jones, D. K. & Veraart, J. (2021). Toward more robust and reproducible diffusion kurtosis imaging. Magnetic Resonance in Medicine, 86(3), 1600-1613. https://doi.org/10.1002/mrm.28730

Henriques, R. N., Jespersen, S., Jones, D. K. & Veraart, J. (2021). Towards more robust and reproducible Diffusion Kurtosis Imaging. 2464. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Trusbak Haumann, N., Hansen, B., Huotilainen, M., Vuust, P. & Brattico, E. (2020). Applying stochastic spike train theory for high-accuracy human MEG/EEG. Journal of Neuroscience Methods, 340, [108743]. https://doi.org/10.1016/j.jneumeth.2020.108743

Henriques, R. N., Jespersen, S. & Shemesh, N. (2020). Correlation Tensor Imaging - resolving non-Gaussian diffusion sources of in vivo tissues. 0717. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2020). Correlation tensor magnetic resonance imaging. NeuroImage, 211, [116605]. https://doi.org/10.1016/j.neuroimage.2020.116605

Lindhardt, T. B. & Hansen, B. (2020). Det er tid til at vågne op! Aktuel Naturvidenskab, 2(1). https://aktuelnaturvidenskab.dk/find-artikel/nyeste-numre/2-2020/hjerneforskning/

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. N. (2020). Diffusion Kurtosis Imaging maps neural damage in the EAE model of multiple sclerosis. NeuroImage, 208, [116406]. https://doi.org/10.1016/j.neuroimage.2019.116406

Hansen, B. (2020). Diffusion kurtosis imaging as a tool in neurotoxicology. Neurotoxicity Research, 37(1), 41-47. https://doi.org/10.1007/s12640-019-00100-3

Simoes, R., Isturiz, J., Lynge Olesen, J., Jespersen, S. & Shemesh, N. (2020). Dynamic assessment of early metabolic perturbations in glioma-bearing mice using denoised 2H-MRS. 0475. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Angleys, H. & Østergaard, L. (2020). Krogh's capillary recruitment hypothesis, 100 years on: Is the opening of previously closed capillaries necessary to ensure muscle oxygenation during exercise? A J P: Heart and Circulatory Physiology (Online), 318(2), H425-H447. https://doi.org/10.1152/ajpheart.00384.2019

Henriques, R. N., Olesen, J. L., Jespersen, S. & Shemesh, N. (2020). Measuring the full diffusional intra- and inter-compartmental kurtosis tensors using double diffusion encoding. 0742. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Blackband, S. J., Flint, J., Hansen, B., Shepherd, T. M., Heon-Lee, C., Streit, W. J. & Forder, J. (2020). On the Origins of Diffusion MRI Signal Changes in Stroke. Frontiers in Neurology, 11, [549]. https://doi.org/10.3389/fneur.2020.00549

Coelho, S., Pozo, J. M., Jespersen, S., Frangi, A. F., Novikov, D. S. & Fieremans, E. (2020). Optimal experimental design in multidimensional diffusion MRI for parameter estimation of biophysical tissue models. 0731. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Sandgaard, A. D. & Jespersen, S. (2020). Sharper Images in Quantitative Susceptibility Mapping with Magnetometric Dipole Kernels. 3197. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Lynge Olesen, J. & Jespersen, S. (2020). Stick power law scaling in neurons withstands realistic curvature and branching. 0716. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Dudele, A., Rasmussen, P. M. & Østergaard, L. (2020). Sural Nerve Perfusion in Mice. Frontiers in Neuroscience, 14, [579373]. https://doi.org/10.3389/fnins.2020.579373

Lee, H-H., Jespersen, S. N., Fieremans, E. & Novikov, D. S. (2020). The impact of realistic axonal shape on axon diameter estimation using diffusion MRI. NeuroImage, 223, [117228]. https://doi.org/10.1016/j.neuroimage.2020.117228

Flint, J., Menon, K., Hansen, B., Forder, J. & Blackband, S. (2020). Visualization of Live, Mammalian Neurons During Kainate-Infusion Using Magnetic Resonance Microscopy. NeuroImage, [116997]. https://doi.org/10.1016/j.neuroimage.2020.116997

Rasmussen, P. M., Aamand, R., Weitzberg, E., Christiansen, M., Østergaard, L. & Lund, T. E. (2019). APOE gene-dependent BOLD responses to a breath-hold across the adult lifespan. NeuroImage: Clinical, 24, [101955]. https://doi.org/10.1016/j.nicl.2019.101955

Hansen, B. (2019). An Introduction to Kurtosis Fractional Anisotropy. American Journal of Neuroradiology, 40(10), 1638-1641. https://doi.org/10.3174/ajnr.A6235

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Beyond the Standard Model in Spinal Cord. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Anzabi, M., Angleys, H., Aamand, R., Ardalan, M., Mouridsen, K., Rasmussen, P. M., Sørensen, J. C. H., Plesnila, N., Østergaard, L. & Iversen, N. K. (2019). Capillary flow disturbances after experimental subarachnoid hemorrhage: a contributor to delayed cerebral ischemia? Microcirculation, 26(3), [e12516]. https://doi.org/10.1111/micc.12516

Rasmussen, P. M., Aamand, R., Weitzberg, E., Christiansen, M., Østergaard, L. & Lund, T. E. (2019). Changes in dynamics of cerebrovascular reactivity responses to breath-hold in APOE e4 carriers across the adult lifespan. Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl), [PB02-O10]. https://doi.org/10.1177/0271678X19851020

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). Correlation Tensor Imaging (CTI): resolving diffusion sources of non-Gaussian diffusion. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. (2019). Diffusion Kurtosis Imaging (DKI) Biomarkers correlate with dysfunction in the EAE model of MS. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Næss-Schmidt, E., Blicher, J. U., Møller, M. T., Rask, C. U., Svendsen, S. W., Schröder, A., Tuborgh, A. H., Østergaard, L., Jespersen, S., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2019). Diffusion kurtosis imaging in patients with prolonged post-concussion symptoms. Journal of Psychosomatic Research, 121, 123. https://doi.org/10.1016/j.jpsychores.2019.03.073

Coelho, S., Pozo, J. M., Jespersen, S., Jones, D. K. & Frangi, A. F. (2019). Double diffusion encoding enables unique parameter estimation of the Standard Model in diffusion MRI. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Valette, J., Ronen, I. & Jespersen, S. N. (2019). Editorial: Assessing cellular microstructure in biological tissues using in vivo diffusion-weighted magnetic resonance. Frontiers in Physics, 7, [37]. https://doi.org/10.3389/fphy.2019.00037

Jespersen, S., Fieremans, E. & Novikov, D. S. (2019). Effective medium theory of multiple diffusion encoding. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Jespersen, S., Lynge Olesen, J., Ianuş, A. & Shemesh, N. (2019). Effects of nongaussian diffusion on “isotropic diffusion“ measurements: an ex-vivo microimaging and simulation study. Journal of Magnetic Resonance, 300, 84-94. https://doi.org/10.1016/j.jmr.2019.01.007

Does, M. D., Olesen, J. L., Harkins, K. D., Serradas-Duarte, T., Gochberg, D. F., Jespersen, S. N. & Shemesh, N. (2019). Evaluation of principal component analysis image denoising on multi-exponential MRI relaxometry. Magnetic Resonance in Medicine, 81(6), 3503-3514. https://doi.org/10.1002/mrm.27658

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D. & Jespersen, S. (2019). Functional and microstructural alterations in the rat hippocampus after repetitive mild traumatic brain injury. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Aamand, R., Rasmussen, P. M., Weitzberg, E., Christiansen, M., Lund, T. E. & Østergaard, L. (2019). Local and global microvascular disturbances in the brains of APOE-ɛ4 carriers: Vascular and cognitive responses to nitrate supplementation. Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl), [PB02-O12]. https://doi.org/10.1177/0271678X19851020

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D., Østergaard, L. & Jespersen, S. (2019). Longitudinal, multiparametric MRI of repetitive mild traumatic brain injury in rats. 53-54. Abstract from Neuroscience Day 2019, Aarhus, Denmark.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2019). Microscopic anisotropy misestimation in spherical-mean single diffusion encoding MRI. Magnetic Resonance in Medicine, 81(5), 3245-3261. https://doi.org/10.1002/mrm.27606

Khan, A. R., Hansen, B., Danladi, J., Chuhutin, A., Wiborg, O., Nyengaard, J. R. & Jespersen, S. (2019). Neurite atrophy in dorsal hippocampus of rat indicates incomplete recovery of chronic mild stress induced depression: Neurite atrophy in the hippocampus show partial recovery of depression. NMR in Biomedicine, 32(3). https://doi.org/doi.org/10.1002/nbm.4057

Coelho, S., Pozo, J. M., Jespersen, S. N. & Frangi, A. F. (2019). Optimal Experimental Design for Biophysical Modelling in Multidimensional Diffusion MRI. In D. Shen, T. Liu, T. M. Peters, L. H. Staib, C. Essert, S. Zhou, P-T. Yap & A. Khan (Eds.), Medical Image Computing and Computer Assisted Intervention – MICCAI 2019: Proceedings (Vol. III, pp. 617-625). Springer. Lecture Notes in Computer Science Vol. 11766 https://doi.org/10.1007/978-3-030-32248-9_69

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Propagation of Bias in Moment-Matching Based Standard Model Parameter Estimation. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Novikov, D. S., Fieremans, E., Jespersen, S. N. & Kiselev, V. G. (2019). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation. NMR in Biomedicine, 32(4), [e3998]. https://doi.org/10.1002/nbm.3998

Doucette, J., Wei, L., Hernández-Torres, E., Kames, C., D. Forkert, N., Olesen, R. A., Lund, T. E., Hansen, B. & Rauscher, A. (2019). Rapid solution of the Bloch-Torrey equation in anisotropic tissue: Application to dynamic susceptibility contrast MRI of cerebral white matter. NeuroImage, 185, 198-207. https://doi.org/10.1016/j.neuroimage.2018.10.035

Gutiérrez-Jiménez, E., Fruekilde, S., Rasmussen, P. M., Mikkelsen, I. K., Iversen, N. K., Bordoni, L., Fossati, S., Ramos-Cejudo, J., Sakadzic, S. & Østergaard, L. (2019). The effect of carbonic anhydrase inhibitors in brain microcirculation of the Tg-SwDI model of Alzheimer's disease. Journal of Cerebral Blood Flow and Metabolism, 39(1_suppl), [PB02-O02]. https://doi.org/10.1177/0271678X19851020

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). The two-compartment diffusion “standard model” misestimates microscopic anisotropy in-vivo. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Ianus, A., Jespersen, S., Drobjnak, I. & Shemesh, N. (2018). Accurate Estimation of Microscopic Diffusion Anisotropy Using Multi-shell Double Diffusion Encoding. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Ianuş, A., Jespersen, S. N., Serradas Duarte, T., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2018). Accurate estimation of microscopic diffusion anisotropy and its time dependence in the mouse brain. NeuroImage, 183, 934-949. https://doi.org/10.1016/j.neuroimage.2018.08.034

Qvist, P., Eskildsen, S. F., Hansen, B., Baragji, M., Ringgaard, S., Roovers, J., Paternoster, V., Molgaard, S., Corydon, T. J., Stødkilde-Jørgensen, H., Glerup, S., Mors, O., Wegener, G., Nyengaard, J. R., Børglum, A. D. & Christensen, J. H. (2018). Brain volumetric alterations accompanied with loss of striatal medium-sized spiny neurons and cortical parvalbumin expressing interneurons in Brd1+/- mice. Scientific Reports, 8(1), 16486. https://doi.org/10.1038/s41598-018-34729-5

Næss-Schmidt, E. T., Blicher, J. U., Tietze, A., Rask, C. U., Svendsen, S. W., Schröder, A., Thastum, M. M., Tuborgh, A. H., Frederiksen, O-V., Østergaard, L., Eskildsen, S. F., Hansen, B., Jespersen, S. & Nielsen, J. F. (2018). Diffusion MRI findings in patients with extensive and minimal post-concussion symptoms after mTBI and healthy controls - a cross sectional study. Brain Injury, 32(1), 91-98. https://doi.org/10.1080/02699052.2017.1377352

Jespersen, S. N., Olesen, J. L., Hansen, B. & Shemesh, N. (2018). Diffusion time dependence of microstructural parameters in fixed spinal cord. NeuroImage, 182, 329-342. https://doi.org/10.1016/j.neuroimage.2017.08.039

Gutierrez-Jimenez, E., Angleys, H., Rasmussen, P. M., West, M. J., Catalini, L., Iversen, N. K., Jensen, M. S., Frische, S. & Ostergaard, L. (2018). Disturbances in the control of capillary flow in an aged APP(swe)/PS1 Delta E9 model of Alzheimer's disease. Neurobiology of Aging, 62, 82-94. https://doi.org/10.1016/j.neurobiolaging.2017.10.006

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). EVALUATION OF PCA DENOISING OF MRI RELAXOMETRY DATA. In Proceedings of 2018 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2018)

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). Evaluation of Marchenko-Pastur PCA denoising on Multi-Exponential Relaxometry. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. (2018). Ex-vivo diffusion MRI reveals microstructural alterations in stress-sensitive brain regions: A chronic mild stress recovery study. Abstract from Joint ISMRM and ESMRMB conference, Paris, Paris, France.

Anzabi, M., Ardalan, M., Iversen, N. K., H. Rafati, A., Hansen, B. & Østergaard, L. (2018). Hippocampal Atrophy Following Subarachnoid Hemorrhage Correlates with Disruption of Astrocyte Morphology and Capillary Coverage by AQP4. Frontiers in Cellular Neuroscience, 12(19).

Jespersen, S., Olesen, J. L., Ianus, A. & Shemesh, N. (2018). Implications of nongaussian diffusion on the interpretation of multidimensional diffusion measurements. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Khan, A. R., Hansen, B., Iversen, N. K., Angoa-Perez, M., Kuhn, D. & Jespersen, S. (2018). Longitudinal metabolic alterations in the cerebral cortex of rats after repetitive mild traumatic brain injury. 1.

Khan, A. R., Jespersen, S., Wiborg, O., Kroenke, C. & Hansen, B. (2018). Microstructural and Metabolic Recovery of Anhedonic Rat Brains: An In Vivo Diffusion MRI and 1H-MRS Approach. DATA, 3(3). https://doi.org/10.3390/data3030029

Rasmussen, P. M., Secomb, T. W. & Pries, A. R. (2018). Modeling the hematocrit distribution in microcirculatory networks: A quantitative evaluation of a phase separation model: A quantitative evaluation of a phase separation model. Microcirculation, 25(3), [12445]. https://doi.org/10.1111/micc.12445

Bay, V., Kjølby, B. F., Iversen, N. K., Mikkelsen, I. K., Ardalan, M., Nyengaard, J. R., Jespersen, S. N., Drasbek, K. R., Østergaard, L. & Hansen, B. (2018). Stroke infarct volume estimation in fixed tissue: Comparison of diffusion kurtosis imaging to diffusion weighted imaging and histology in a rodent MCAO model. PLOS ONE, 13(4), e0196161. https://doi.org/10.1371/journal.pone.0196161

Gutiérrez-Jiménez, E., Angleys, H., Rasmussen, P. M., Mikkelsen, I. K., Mouridsen, K. & Østergaard, L. (2018). The effects of hypercapnia on cortical capillary transit time heterogeneity (CTH) in anesthetized mice. Journal of Cerebral Blood Flow and Metabolism, 38(2), [271678X17692598]. https://doi.org/10.1177/0271678X17692598

Jespersen, S. N., Olesen, J. L., Ianuş, A. & Shemesh, N. (2017). Anisotropy in "isotropic diffusion" measurements due to nongaussian diffusion. arXiv preprint. http://arxiv.org/abs/1712.02290

Nielsen, R. B., Egefjord, L., Angleys, H., Mouridsen, K., Gejl, M., Møller, A., Brock, B., Brændgaard, H., Gottrup, H., Rungby, J., Eskildsen, S. F. & Østergaard, L. (2017). Capillary dysfunction is associated with symptom severity and neurodegeneration in Alzheimer's disease. Alzheimer's & Dementia, 13(10), 1143-1153. https://doi.org/10.1016/j.jalz.2017.02.007

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Nielsen, R. B., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Lund, T. E., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2017). Increased cortical capillary transit time heterogeneity in Alzheimer’s disease: a DSC-MRI perfusion study. Neurobiology of Aging, 50, 107-118. https://doi.org/10.1016/j.neurobiolaging.2016.11.004

Alstrup, A. K. O., Munk, O. L., Jensen, T. H., Jensen, L. F., Hedayat, A. & Hansen, B. (2017). Magnetic resonance imaging and computed tomography as tools for the investigation of sperm whale (Physeter macrocephalus) teeth and eye. Acta Veterinaria Scandinavica (Online), 59(38), 1-8.

Nunes, D., Cruz, T. L., Jespersen, S. N. & Shemesh, N. (2017). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. Journal of Magnetic Resonance, 277, 117. https://doi.org/10.1016/j.jmr.2017.02.017

Flint, J., Menon, K., Hansen, B., Forder, J. & Blackband, S. (2017). Metabolic Support of Excised, Living Brain Tissues During Magnetic Resonance Microscopy Acquisition. Journal of Visualized Experiments.

Næss-Schmidt, E. T., Blicher, J. U., Eskildsen, S. F., Tietze, A., Hansen, B., Stubbs, P. W., Jespersen, S., Østergaard, L. & Nielsen, J. F. (2017). Microstructural changes in the thalamus after mild traumatic brain injury: A longitudinal diffusion and mean kurtosis tensor MRI study. Brain Injury, 31(2), 230-236. https://doi.org/10.1080/02699052.2016.1229034

Rasmussen, P. M., Smith, A. F., Sakadžić, S., Boas, D. A., Pries, A. R., Secomb, T. W. & Østergaard, L. (2017). Model-based inference from microvascular measurements: Combining experimental measurements and model predictions using a Bayesian probabilistic approach. Microcirculation, 24(4). https://doi.org/10.1111/micc.12343

Chuhutin, A., Hansen, B. & Jespersen, S. N. (2017). Precision and accuracy of diffusion kurtosis estimation and the influence of b-value selection. NMR in Biomedicine, 30(11). https://doi.org/10.1002/nbm.3777

Garza-Villarreal, E. A., Chakravarty, M. M., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2017). The effect of crack cocaine addiction and age on the microstructure and morphology of the human striatum and thalamus using shape analysis and fast diffusion kurtosis imaging. Translational Psychiatry, 7, [1122]. https://doi.org/10.1038/tp.2017.92

Ianus, A., Jespersen, S. N., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2017). Time Dependence of Microscopic Anisotropy in the Mouse Brain Measured with Double Oscillating Diffusion Encoding (DODE) MRI. In Proceedings of ISMRM 25th Annual Meeting (Vol. 25, pp. 0277)

Olesen, J. L., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time Dependence of White Matter Biomarkers from Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 0841)

Lynge Olesen, J., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time dependence of kurtosis and intra-and extra-axonal diffusivity using axisymmetric diffusion kurtosis imaging. Poster session presented at ISMRM Workshop on Quantitative MRI in White Matter Disorders: Useful, Usable, Used?, Vancouver, Canada.

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2017). White Matter Biomarkers from Fast Protocols Using Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 1742)

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Eskildsen, S. F., Østergaard, L. & Jespersen, S. N. (2017). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging. NMR in Biomedicine, 30(9), [e3741]. https://doi.org/10.1002/nbm.3741

Lasic, S., Jespersen, S. N., Lundell, H., Nilsson, M., Dyrby, T. & Topgaard, D. (2016). Apparent Exchange Rate in Multi-Compartment Anisotropic Tissue. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Biophysical modeling of high field diffusion MRI demonstrates micro-structural aberration in chronic mild stress rat brain. NeuroImage, 142, 421-430. https://doi.org/10.1016/j.neuroimage.2016.07.001

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2016). Capillary dysfunction in Alzheimer’s disease correlates with cognitive decline. Abstract from 10th FENS FORUM of Neuroscience 2016, København, Denmark.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Chronic Mild Stress Induces Changes in Neurite Density in the Amygdala as Revealed by Diffusion MRI and Validated with Novel Histological Analyses. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Skakkebæk, A., Gravholt, C. H., Rasmussen, P. M., Bojesen, A., Jensen, J. S., Fedder, J., Laurberg, P., Hertz, J. M., Østergaard, J. R., Pedersen, A. D. & Wallentin, M. (2016). Corrigendum to "Neuroanatomical correlates of Klinefelter syndrome studied in relation to the neuropsychological profile" [NeuroImage:Clin 4 (2014) 1-9]. NeuroImage: Clinical, 11, 52. https://doi.org/10.1016/j.nicl.2016.01.005

Flint, J. J., Hansen, B. & Blackband, S. J. (2016). Diffusion tensor microscopy data (15.6µm in-plane) of white matter tracts in the human, pig, and rat spinal cord with corresponding tissue histology. Data in Brief.

Gutiérrez-Jiménez, E., Cai, C., Mikkelsen, I. K., Rasmussen, P. M., Angleys, H., Merrild, M., Mouridsen, K., Jespersen, S. N., Lee, J., Iversen, N. K., Sakadzic, S. & Østergaard, L. (2016). Effect of electrical forepaw stimulation on capillary transit-time heterogeneity (CTH). Journal of Cerebral Blood Flow and Metabolism, 36(12), 2072-2086. https://doi.org/10.1177/0271678X16631560

Kjølby, B. F., Khan, A. R., Chuhutin, A., Pedersen, L. H., Jensen, J. B., Jakobsen, S., Zeidler, D., Sangill, R., Nyengaard, J. R., Jespersen, S. N. & Hansen, B. (2016). Fast diffusion kurtosis imaging of fibrotic mouse kidneys. NMR in Biomedicine, 29(12), 1709.

Hansen, B., Shemesh, N. & Jespersen, S. N. (2016). Fast imaging of mean, axial and radial diffusion kurtosis. NeuroImage, 142, 381. https://doi.org/10.1016/j.neuroimage.2016.08.022

Hansen, B. & Jespersen, S. N. (2016). Kurtosis fractional anisotropy: its contrast and estimation by proxy. Scientific Reports, 6(23999).

Nunes, D., Cruz, T. L., Jespersen, S. & Shemesh, N. (2016). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. arXiv.

Novikov, D. S., Jespersen, S. N., Kiselev, V. G. & Fieremans, E. (2016). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation. arXiv preprint, [1612.02059v1].

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Summary of high field diffusion MRI and microscopy data demonstrate microstructural aberration in chronic mild stress rat brain. Data in Brief, 8, 934-937. https://doi.org/10.1016/j.dib.2016.06.061

Nunes, D., Cruz, T., Jespersen, S. N. & Shemesh, N. (2016). Susceptibility-Driven Oscillations in Multi-Gradient-Echo MRI Reflect Axonal Microstructures. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Chuhutin, A., Shemesh, N., Hansen, B. & Jespersen, S. N. (2016). The Importance of B-Values Selection and the Precision of Diffusion Kurtosis Estimation by the Conventional Schemes. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Garza-Villarreal, E. A., Mallar, C., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2016). The effect of crack cocaine addiction on the microstructure and morphology of the human striatum and thalamus using novel shape analysis and fast diffusion kurtosis imaging. bioRxiv, (066647), [066647]. https://doi.org/10.1101/066647

Angleys, H., Jespersen, S. & Østergaard, L. (2016). The effects of capillary transit time heterogeneity (CTH) on the cerebral uptake of glucose and glucose analogs: Application to FDG and comparison to oxygen uptake. Frontiers in Computational Neuroscience, 10, [103]. https://doi.org/10.3389/fncom.2016.00103

Jespersen, S. N., Hansen, B., Nunes, D. & Shemesh, N. (2016). Time Dependence of Diffusion and Kurtosis Parameters in the Rat Spinal Cord. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2016). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging. arXiv preprint, [1610.02783].

Khan, A. R., Cornea, A., Leigland, L. A., Kohama, S. G., Jespersen, S. N. & Kroenke, C. D. (2015). 3D structure tensor analysis of light microscopy data for validating diffusion MRI. NeuroImage, 111, 192-203. https://doi.org/10.1016/j.neuroimage.2015.01.061

Flint, J., Menon, K., Hansen, B., Forder, J. & Blackband, S. (2015). A Microperfusion and In-Bore Oxygenator System Designed for Magnetic Resonance Microscopy Studies on Living Tissue Explants. Scientific Reports, 5(18095).

Khan, A. R., Chuhutin, A., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. N. (2015). Biophysical Modeling of High Field Diffusion MRI Demonstrates Micro-Structural Aberration in Chronic Mild Stress (CMS) Rat Brain. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Østergaard, L., Jespersen, S. N., Engedal, T. S., Jiménez, E. G., Ashkanian, M., Hansen, M. B., Eskildsen, S. & Mouridsen, K. (2015). Capillary dysfunction: Its detection and causative role in dementias and stroke. Current Neurology and Neuroscience Reports, 15(6), 37. https://doi.org/10.1007/s11910-015-0557-x

Flint, J., Hansen, B. & Blackband, S. (2015). Cellular-level investigation of a diffusion time dependent contrast enhancement technique for oncological imaging. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2015). Cortical capillary dysfunction in patients suspected of Alzheimer’s disease. Abstract from The Alzheimer's Association International Conference 2015, Washington D.C., United States. https://doi.org/10.1016/j.jalz.2015.06.1767

Kjølby, B. F., Jakobsen, S., Jensen, J., Pedersen, L. H., Rydtoft, L. M., Jespersen, S. N. & Hansen, B. (2015). Diffusion Kurtosis Imaging of Fibrotic Mouse Kidneys. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Haack, S., Tanderup, K., Kallehauge, J. F., Mohamed, S. M. I., Lindegaard, J. C., Pedersen, E. M. & Jespersen, S. N. (2015). Diffusion-weighted magnetic resonance imaging during radiotherapy of locally advanced cervical cancer - treatment response assessment using different segmentation methods. Acta Oncologica, 54(9), 1535-1542. https://doi.org/10.3109/0284186X.2015.1062545, https://doi.org/10.3109/0284186X.2015.1062545

Lee, C. H., Flint, J., Hansen, B. & Blackband, S. (2015). Investigation of the subcellular architecture of L7 neurons of Aplysia californica using magnetic resonance microscopy (MRM) at 7.8 microns. Scientific Reports.

Tietze, A., Hansen, M. B., Østergaard, L., Jespersen, S. N., Sangill, R., Lund, T. E., Geneser, M., Hjelm, M. & Hansen, B. (2015). Mean Diffusional Kurtosis in Patients with Glioma: Initial Results with a Fast Imaging Method in a Clinical Setting. American Journal of Neuroradiology, 36(8), 1472-1478. https://doi.org/10.3174/ajnr.A4311

Østergaard, L., Granfeldt, A., Secher, N., Tietze, A., Iversen, N. K., Jensen, M. S., Andersen, K. K., Nagenthiraja, K., Gutiérrez-Lizardi, P., Mouridsen, K., Jespersen, S. N. & Tønnesen, E. K. (2015). Microcirculatory dysfunction and tissue oxygenation in critical illness. Acta Anaesthesiologica Scandinavica, 59(10), 1246-59. https://doi.org/10.1111/aas.12581

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2015). Neurite density from an isotropic diffusion model.

Østergaard, L., Dreier, J. P., Hadjikhani, N., Jespersen, S. N., Dirnagl, U. & Dalkara, T. (2015). Neurovascular coupling during cortical spreading depolarization and -depression. Stroke; a journal of cerebral circulation, 46(5), 1392-401. https://doi.org/10.1161/STROKEAHA.114.008077

Chuhutin, A., Khan, A. R., Hansen, B. & Jespersen, S. N. (2015). The Mean Kurtosis Evaluation Measurements Show a Considerable Disparity from the Analytically Evaluated Ones for a Clinically Used Range of B-Values. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Østergaard, L., Finnerup, N. B., Terkelsen, A. J., Olesen, R. A., Drasbek, K. R., Knudsen, L., Jespersen, S. N., Frystyk, J., Charles, M., Thomsen, R. W., Christiansen, J. S., Beck-Nielsen, H., Jensen, T. S. & Andersen, H. (2015). The effects of capillary dysfunction on oxygen and glucose extraction in diabetic neuropathy. Diabetologia, 58(4), 666-677. https://doi.org/10.1007/s00125-014-3461-z

Angleys, H., Østergaard, L. & Jespersen, S. N. (2015). The effects of capillary transit time heterogeneity (CTH) on brain oxygenation. Journal of Cerebral Blood Flow and Metabolism, 35(5), 806-17. https://doi.org/10.1038/jcbfm.2014.254

Rasmussen, P. M., Jespersen, S. N. & Ostergaard, L. (2015). The effects of transit time heterogeneity on brain oxygenation during rest and functional activation. Journal of Cerebral Blood Flow and Metabolism, 35(3), 432-42. https://doi.org/10.1038/jcbfm.2014.213

Lundell, H., Dyrby, T., Hubbard Cristinacce, P., Zhou, F-L., Parker, G. & Jespersen, S. N. (2015). Validation of Double Diffusion Schemes of Microscopic Fractional Anisotropy. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Khan, A. R., Leigland, L., Kohama, S., Cornea, A., Jespersen, S. N. & Kroenke, C. (2014). 3D Structure Tensor Analysis of Light Microscopy Data for Validating Diffusion MRI. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2014). A Fast and Robust Method for Simultaneous Estimation of Mean Diffusivity and Mean Tensor Kurtosis. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Næss-Schmidt, E., Blicher, J., Tietze, A., Eskildsen, S. F., Hansen, B., Lund, T. E., Østergaard, L. & Nielsen, J. F. (2014). Biomarkers in the brain after mTBI: A multimodal MRI study. Poster session presented at 8th World Congress for NeuroRehabilitation, Istanbul, Turkey.

Østergaard, L., Terkelsen, A. J., Finnerup, N. B., Knudsen, L., Drasbek, K. R., Jespersen, S. N., Svensson, P., Sørensen, J. C. H. & Jensen, T. S. (2014). Capillary dysfunction and impaired tissue oxygenation in complex regional pain syndrome: A hypothesis. Pain, 155(10), 1922-1926. https://doi.org/10.1016/j.pain.2014.06.005

Østergaard, L., Engedal, T. S., Aamand, R., Mikkelsen, R., Iversen, N. K., Anzabi, M., Næss-Schmidt, E., Drasbek, K. R., Bay, V., Blicher, J., Tietze, A., Mikkelsen, I. K., Hansen, B., Jespersen, S. N., Juul, N., Sørensen, J. CH. & Rasmussen, M. (2014). Capillary transit time heterogeneity and flow-metabolism coupling after traumatic brain injury. Journal of Cerebral Blood Flow and Metabolism, 34(10), 1585-1598. https://doi.org/10.1038/jcbfm.2014.131

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M., Dalby, R., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2014). Capillary transit time heterogeneity in the cerebrum correlate with cognitive decline in AD. https://doi.org/10.1016/j.jalz.2014.05.478

Haack, S., Kallehauge, J. F., Jespersen, S. N., Lindegaard, J. C., Tanderup, K. & Pedersen, E. M. (2014). Correction of diffusion-weighted magnetic resonance imaging for brachytherapy of locally advanced cervical cancer. Acta Oncologica, 53(8), 1073-1078. https://doi.org/10.3109/0284186X.2014.938831

Haack, S., Tanderup, K., Kallehauge, J., Lindegaard, J. C., Morre-Pedersen, E. & Jespersen, S. N. (2014). Diffusion Weighted MRI for Radiotherapy Treatment of Locally Advanced Cervical Cancer – Treatment Response Assessment Using Different Segmentation Methods. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2014). Erratum: Hansen, Lund, Sangill, and Jespersen. Experimentally and Computationally Fast Method for Estimation of a Mean Kurtosis. Magnetic Resonance in Medicine 69:1754–1760 (2013). Magnetic Resonance in Medicine, 71(6), 2250. https://doi.org/10.1002/mrm.25090

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2014). Erratum: Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments. N M R in Biomedicine (Online), 27(6), 738-738. https://doi.org/10.1002/nbm.3125

Rydtoft, L. M., Hansen, B., Hansen, M. B. & Jespersen, S. N. (2014). Experimentally Estimated Non-Gaussian Water Diffusion at a Large Range of B-Values. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Skakkebæk, A., Gravholt, C. H., Rasmussen, P. M., Bojesen, A., Jensen, J. S., Fedder, J., Laurberg, P., Hertz, J. M., Østergaard, J. R., Pedersen, A. D. & Wallentin, M. (2014). Neuroanatomical correlates of Klinefelter syndrome studied in relation to the neuropsychological profile. NeuroImage: Clinical, 4, 1-9. https://doi.org/10.1016/j.nicl.2013.10.013

Mouridsen, K., Hansen, M. B., Østergaard, L. & Jespersen, S. N. (2014). Reliable estimation of capillary transit time distributions using DSC-MRI. Journal of Cerebral Blood Flow and Metabolism, 34(9), 1511-21. https://doi.org/10.1038/jcbfm.2014.111

Østergaard, L., Kristiansen, S. B., Angleys, H., Frøkiær, J., Michael Hasenkam, J., Jespersen, S. N. & Bøtker, H. E. (2014). The role of capillary transit time heterogeneity in myocardial oxygenation and ischemic heart disease. Basic Research in Cardiology, 109(3), [409]. https://doi.org/10.1007/s00395-014-0409-x

Østergaard, L., Nagenthiraja, K., Gyldensted, L., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & West, M. J. (2013). Capillary Dysfunction in Alzheimer's Disease. Poster session presented at Alzheimer's Association International Conference, Boston, United States.

Jespersen, S. N. (2013). Comment on “Measuring small compartments with relatively weak gradients by angular double-pulsed-field-gradient NMR” by Morozov Bar, Sochen, and Cohen. Magnetic Resonance Imaging, 31(9), 1643-1644. https://doi.org/10.1016/j.mri.2013.07.006

Haack, S., Tanderup, K., Fokdal, L., Kallehauge, J. F., Lindegaard, J. C., Jespersen, S. N. & Pedersen, E. M. (2013). Diffusion Weighted MRI as a predictive tool for effect of radiotherapy in locally advanced cervical cancer. Poster session presented at ISMRM 2013, Salt Lake City, United States.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2013). Experimentally and computationally fast method for estimation of a mean kurtosis. Abstract from International Society for Magnetic Resonance in Medicine 21st Annual Meeting and Exhibition, Salt Lake City, UT, United States.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2013). Experimentally and computationally fast method for estimation of a mean kurtosis. Magnetic Resonance in Medicine, 69(6), 1754-1760. https://doi.org/10.1002/mrm.24743

Hansen, B. (2013). Fysikken bag MR-skanning af hjernen. In H. Blæsild Vuust (Ed.), Hjernen - fra celle til samfund (pp. 60-76). Forlaget Systime.

Østergaard, L., Bjarkam, C. R., Kringelbach, M. L., Hansen, B., Wallentin, M., Vuust, P., Schjødt, U., Petersen, M. B., Drasbek, K. R. & Lindeløv, J. K. (2013). Hjernen- fra celle til samfund. Systime Academic.

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2013). Increased cerebral oxygen extraction capacity in patients with Alzheimer’s disease. Abstract from Alzheimer's Association International Conference, Boston, United States. https://doi.org/10.1016/j.jalz.2013.05.173

Alstrup, A. K. O., Hansen, B. & Winterdahl, M. (2013). Neuroimaging of white matter lesions and ischemia in Göttingen minipigs – a pilot study. Ellegaard Newsletter, 40, 8.

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2013). Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments. NMR in Biomedicine, 26, 1647-1662. https://doi.org/10.1002/nbm.2999

Jespersen, S. N., Lundell, H., Sønderby, C. & Dyrby, T. (2013). Rotationally invariant double pulsed field gradient diffusion imaging. Abstract from ISMRM 2013, Salt Lake City, United States.

Østergaard, L., Aamand, R., Gutiérrez Jiménez, E., Ho, Y. C. L., Blicher, J., Madsen, S. M., Nagenthiraja, K., Dalby, R. B., Drasbek, K. R., Møller, A., Brændgaard, H., Mouridsen, K., Jespersen, S. N., Jensen, M. S. & West, M. J. (2013). The capillary dysfunction hypothesis of Alzheimer's disease. Neurobiology of Aging, 34(4), 1018-31. https://doi.org/10.1016/j.neurobiolaging.2012.09.011

Østergaard, L., Tietze, A., Nielsen, T., Drasbek, K. R., Mouridsen, K., Jespersen, S. N. & Horsman, M. R. (2013). The relationship between tumor blood flow, angiogenesis, tumor hypoxia, and aerobic glycolysis. Cancer Research, 73(18), 5618-5624. https://doi.org/10.1158/0008-5472.CAN-13-0964

Hansen, M. B., Jespersen, S. N., Leighland, L. & Kroenke, C. (2013). Using diffusion anisotropy to characterize neuronal morphology in gray matter: the orientation distribution of axons and dendrites in the NeuroMorpho.org database. Frontiers in Integrative Neuroscience, 7.

Hansen, B. & Østergaard, L. (2013). Vigtige metoder til undersøgelse af hjernen. In H. Blæsild Vuust (Ed.), Hjernen - fra celle til samfund (pp. 164-167)

Haack, S., Pedersen, E. M., Vinding, M. S., Kallehauge, J., Lindegaard, J. C., Tanderup, K. & Jespersen, S. N. (2012). B0-correction and k-means clustering for accurate and automatic identification of regions with reduced apparent diffusion coefficient (ADC) in adva nced cervical cancer at the time of brachytherapy. Poster session presented at ISMRM 20TH Annual Meeting & Exhibition, Melbourne, Australia.

Jespersen, S. N. (2012). Equivalence of double and single wave vector diffusion contrast at low diffusion weighting. NMR in Biomedicine, 25(6), 813-818. https://doi.org/10.1002/nbm.1808

Flint, J., Hansen, B., Portnoy, S., Lee, C-H., King, M. A., Fey, M., Vincent, F., Stanisz, G. J., Vestergaard-Poulsen, P. & Blackband, S. (2012). Magnetic Resonance Microscopy of Human and Porcine Neurons and Cellular Processes. NeuroImage, 60(2).

Rasmussen, P. M. (2012). Mathematical modeling and visualization of functional neuroimages. http://www.imm.dtu.dk/English/Service/Phonebook.aspx?lg=showcommon&id=00a832ae-d4f9-4c0b-a32f-6bb6b73ebb37

Rasmussen, P. M., Hansen, L. K., Madsen, K. H., Churchill, N. W. & Strother, S. C. (2012). Model sparsity and brain pattern interpretation of classification models in neuroimaging. Pattern Recognition, 45(6), 2085-2100. https://doi.org/10.1016/j.patcog.2011.09.011

Rasmussen, P. M., Abrahamsen, T. J., Madsen, K. H. & Hansen, L. K. (2012). Nonlinear denoising and analysis of neuroimages with kernel principal component analysis and pre-image estimation. NeuroImage, 60(3), 1807-18. https://doi.org/10.1016/j.neuroimage.2012.01.096

Haahr, M. E., Rasmussen, P. M., Madsen, K., Marner, L., Ratner, C. F., Gillings, N. M., Baaré, W. F. C. & Knudsen, G. M. (2012). Obesity is associated with high serotonin 4 receptor availability in the brain reward circuitry. NeuroImage, 61(4), 884-8. https://doi.org/10.1016/j.neuroimage.2012.03.050

Churchill, N. W., Yourganov, G., Spring, R., Rasmussen, P. M., Lee, W., Ween, J. E. & Strother, S. C. (2012). PHYCAA: data-driven measurement and removal of physiological noise in BOLD fMRI. NeuroImage, 59(2), 1299-314. https://doi.org/10.1016/j.neuroimage.2011.08.021

Frokjaer, V. G., Erritzoe, D., Holst, K. K., Jensen, P. S., Rasmussen, P. M., Fisher, P. M., Baaré, W., Madsen, K. S., Madsen, J., Svarer, C. & Knudsen, G. M. (2012). Prefrontal serotonin transporter availability is positively associated with the cortisol awakening response. European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology. https://doi.org/10.1016/j.euroneuro.2012.05.013

Jespersen, S. N. & Østergaard, L. (2012). The roles of cerebral blood flow, capillary transit time heterogeneity, and oxygen tension in brain oxygenation and metabolism. Journal of Cerebral Blood Flow and Metabolism, 32(2), 264-277. https://doi.org/10.1038/jcbfm.2011.153

Rasmussen, P. M., Madsen, K. H., Hansen, L. K., Lund, T. E., Schmah, T., Yourganov, G. & Strother, S. C. (2012). Visualization of nonlinear classification models in neuroimaging: Signed sensitivity maps. In BIOSIGNALS 2012 - Proceedings of the International Conference on Bio-Inspired Systems and Signal Processing (pp. 254-263)

Haack, S., Jespersen, S. N., Lars, F., Lindegaard, J. C., Kallehauge, J., Tanderup, K. & Pedersen, E. M. (2011). Diffusion Weighted MRI (DWI) for Brachytherapy in Locally Advanced Cervical Cancer - Determining the Degree of Distortion at 1.5T and 3T. International Federation for Medical and Biological Engineering Proceedings, 34, 172-175. http://books.google.dk/books?id=Oo9bujV0NikC&printsec=frontcover&hl=da&source=gbs_ge_summary_r&cad=0#v=onepage&q&f=false

Hansen, B., Flint, J. J., Heon-Lee, C., Fey, M., Vincent, F., King, M. A., Vestergaard-Poulsen, P. & Blackband, S. J. (2011). Diffusion tensor microscopy in human nervous tissue with quantitative correlation based on direct histological comparison. NeuroImage, 57(4), 1458. https://doi.org/10.1016/j.neuroimage.2011.04.052

Haack, S., Jespersen, S. N., Fokdal, L., Lindegaard, J. C., Tanderup, K., Kallehauge, J. F. & Pedersen, E. M. (2011). Diffusion weighted MRI (DWI) for brachytherapy in locally advanced cervical cancer - Determining the degree of distortion at 1.5T and 3T MRI. In IFMBE Proceedings (Vol. 34 IFMBE, pp. 172-175) https://doi.org/10.1007/978-3-642-21683-1_43

Vestergaard-Poulsen, P., Wegener, G., Hansen, B., Bjarkam, C. R., Blackband, S. J., Nielsen, N. C. & Jespersen, S. N. (2011). Diffusion-weighted MRI and quantitative biophysical modeling of hippocampal neurite loss in chronic stress. P L o S One, 6(7), e20653. https://doi.org/10.1371/journal.pone.0020653

Frokjaer, V. G., Erritzoe, D., Jensen, P., Rasmussen, P. M., Holst, K. K., Madsen, J., Baare, W. & Knudsen, G. M. (2011). Frontal cortex serotonin transporter binding is positively associated with basal physiological stress reactivity in healthy volunteers. European Neuropsychopharmacology, 21(Suppl. 1), S74.

Erritzoe, D., Frokjaer, V. G., Holst, K. K., Christoffersen, M., Johansen, S. S., Svarer, C., Madsen, J., Rasmussen, P. M., Ramsøy, T., Jernigan, T. L. & Knudsen, G. M. (2011). In vivo imaging of cerebral serotonin transporter and serotonin(2A) receptor binding in 3,4-methylenedioxymethamphetamine (MDMA or "ecstasy") and hallucinogen users. Archives of general psychiatry, 68(6), 562-76. https://doi.org/10.1001/archgenpsychiatry.2011.56

Hansen, B., Flint, J., Lee, C-H., Fey, M., Vincent, F., King, M. A., Vestergaard-Poulsen, P. & Blackband, S. (2011). Investigation of the diffusion tensor's primary eigenvector correspondence to tissue structure in MR microscopy of the human spinal cord with direct comparison to histology..

Flint, J., Hansen, B., Portnoy, S., Lee, C-H., King, M. A., Fey, M., Schmidig, D., Vestergaard-Poulsen, P. & Blackband, S. (2011). Magnetic Resonance Microscopy of Human alpha-Motor Neurons and Cellular Processes.

Vinding, M. S., Maximov, I., Tosner, Z., Jespersen, S. N. & Nielsen, N. C. (2011). Optimal Control Theory in Magnetic Resonance Imaging: Global Optima for 2DRF pulses. Poster session presented at 32nd Annual Danish NMR Meeting, Korsør, Denmark.

Mouridsen, K., Østergaard, L., Christensen, S. & Jespersen, S. N. (2011). Reliable estimation of capillary transit time distributions at voxel-level using DSC-MRI.

Jespersen, S. N. & Buhl, N. (2011). The displacement correlation tensor: Microstructure, ensemble anisotropy and curving fibers. Journal of Magnetic Resonance, 208(1), 34-43.

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Henriette Blæsild Vuust