Publications

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Simoes, R. V., Henriques, R. N., Olesen, J. L., Cardoso, B. M., Fernandes, F. F., Monteiro, M. A. V., Jespersen, S. N., Carvalho, T. & Shemesh, N. (2025). Deuterium metabolic imaging phenotypes mouse glioblastoma heterogeneity through glucose turnover kinetics. eLife, 13. https://doi.org/10.7554/eLife.100570

Madsen, L. S., Thomsen, M. K., Angleys, H., Mikkelsen, I. K., Brooks, D. J., Eskildsen, S. F. & Østergaard, L. (2025). Estimation of oxygen extraction fraction based on hemodynamic measurements using DSC-MRI. Imaging Neuroscience, 3, Article imag_a_00562. https://doi.org/10.1162/imag_a_00562

Chan, K. S., Ma, Y., Lee, H., Marques, J. P., Olesen, J. L., Coelho, S., Novikov, D. S., Jespersen, S. N., Huang, S. Y. & Lee, H. H. (2025). In vivo human neurite exchange time imaging at 500 mT/m diffusion gradients. Imaging Neuroscience, 3, Article imag_a_00544. https://doi.org/10.1162/imag_a_00544

Hochreuter, K., Buti, G., Ajdari, A., Bridge, C. P., Sharp, G. C., Jespersen, S., Lukacova, S., Bortfeld, T. & Kallehauge, J. F. (2025). Investigating the potential of diffusion tensor atlases to generate anisotropic clinical tumor volumes in glioblastoma patients. Physics and Imaging in Radiation Oncology, 33, Article 100688. https://doi.org/10.1016/j.phro.2024.100688

Jespersen, S. N. (2025). Isotropic sampling of tensor-encoded diffusion MRI. Magnetic Resonance in Medicine, 93(5), 2040-2048. https://doi.org/10.1002/mrm.30404

Sandgaard, A. D. & Jespersen, S. (2025). Predicting Mesoscopic Larmor Frequency Shifts in White Matter with Diffusion MRI - A Monte-Carlo Study in Axonal Phantoms. Abstract from 2025 ISMRM & ISMRT Annual Meeting & Exhibition, Honolulu, United States. https://submissions.mirasmart.com/ISMRM2025/Itinerary/ConferenceMatrixEventDetail.aspx?ses=D-107

Sandgaard, A. D. & Jespersen, S. (2025). Predicting Mesoscopic Larmor Frequency Shifts in White Matter With Diffusion MRI—A Monte Carlo Study in Axonal Phantoms. NMR in Biomedicine, 38(3), Article e70004. https://doi.org/10.1002/nbm.70004

Sandgaard, A. D., Jespersen, S., Alstrup, A. K. O., Möller, H., Pampel, A., Wallstein, N., Mildner, T. & Jäger, C. (2025). Predicting Mesoscopic Larmor Frequency Shifts with Diffusion MRI in Ex Vivo Pig Optic Nerve. https://submissions.mirasmart.com/ISMRM2025/Itinerary/ConferenceMatrixEventDetail.aspx?ses=O-35

Sandgaard, A. D. & Jespersen, S. (2025). Rotation-Free Estimation of Anisotropic Transverse Relaxation & Larmor Frequency with Diffusion MRI: A Monte Carlo Study in Axonal Phantoms. Abstract from 2025 ISMRM & ISMRT Annual Meeting & Exhibition, Honolulu, United States. https://submissions.mirasmart.com/ISMRM2025/Itinerary/ConferenceMatrixEventDetail.aspx?ses=D-107

Rasmussen, M., Koch, K. U., Espelund, U. S., Mohamad, N., Korshøj, A. R., Juul, N., Angleys, H., Meng, L., Østergaard, L. & Mikkelsen, I. K. (2024). Blood-brain Barrier Permeability May Influence Vasopressor Effects in Anesthetized Patients with Brain Tumor: An Analysis of Magnetic Resonance Imaging Data. Journal of Neurosurgical Anesthesiology, 36(4), 357-362. https://doi.org/10.1097/ANA.0000000000000948

Simões, R. V., Henriques, R. N., Olesen, J. L., Cardoso, B. M., Fernandes, F. F., Monteiro, M. AV., Jespersen, S. N., Carvalho, T. & Shemesh, N. (2024). Deuterium Metabolic Imaging Phenotypes Mouse Glioblastoma Heterogeneity Through Glucose Turnover Kinetics. eLife Sciences Publications Ltd. https://doi.org/10.7554/elife.100570.1

Gaemelke, T., Laustsen, C., Feys, P., Folkestad, L., Andersen, M. S., Jørgensen, N. R., Jørgensen, M.-L., Jespersen, S. N., Ringgaard, S., Eskildsen, S. F., Dalgas, U. & Hvid, L. G. (2024). Effects of power training in older patients with multiple sclerosis on neurodegeneration, neuromuscular function, and physical function: A study protocol for the "power training in older multiple sclerosis patients (PoTOMS) randomized control trial. Contemporary Clinical Trials Communications, 38, Article 101279. https://doi.org/10.1016/j.conctc.2024.101279

Sandgaard, A. D., Kiselev, V. G., Henriques, R. N., Shemesh, N. & Jespersen, S. N. (2024). Incorporating the effect of white matter microstructure in the estimation of magnetic susceptibility in ex vivo mouse brain. Magnetic Resonance in Medicine, 91(2), 699-715. https://doi.org/10.1002/mrm.29867

Sandgaard, A. D., Shemesh, N., Østergaard, L., Kiselev, V. G. & Jespersen, S. N. (2024). The Larmor frequency shift of a white matter magnetic microstructure model with multiple sources. NMR in Biomedicine, 37(8), Article e5150. https://doi.org/10.1002/nbm.5150

Christensen, N. V., Vaeggemose, M., Bøgh, N., Hansen, E. S. S., Olesen, J. L., Kim, Y., Vigneron, D. B., Gordon, J. W., Jespersen, S. N. & Laustsen, C. (2023). A user independent denoising method for x-nuclei MRI and MRS. Magnetic Resonance in Medicine, 90(6), 2539-2556. https://doi.org/10.1002/mrm.29817

Henriques, R. N., Ianuş, A., Novello, L., Jovicich, J., Jespersen, S. N. & Shemesh, N. (2023). Efficient PCA denoising of spatially correlated redundant MRI data. Imaging Neuroscience, 1, 1-26. https://doi.org/10.1162/imag_a_00049

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2023). Including mesoscopic frequency shifts from fibrous structure of white matter improves accuracy of QSM. 4177. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. (2023). Incorporating susceptibility effects into the standard model of diffusion in white matter. 0975. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. (2023). Incorporating susceptibility effects into the Standard Model of diffusion in white matter. Abstract from Gordon Research Conference on Tissue Microstructure
Imaging, Easton, Massachusetts, United States.

Sandgaard, A. D., Shemesh, N., Kiselev, V. G. & Jespersen, S. N. (2023). Larmor frequency shift from magnetized cylinders with arbitrary orientation distribution. NMR in Biomedicine, 36(3), Article e4859. https://doi.org/10.1002/nbm.4859

Fernandes, F. F., Olesen, J. L., Jespersen, S. N. & Shemesh, N. (2023). MP-PCA denoising of fMRI time-series data can lead to artificial activation “spreading”. NeuroImage, 273, Article 120118. https://doi.org/10.1016/j.neuroimage.2023.120118

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2023). Tensor denoising of multidimensional MRI data. Magnetic Resonance in Medicine, 89(3), 1160-1172. https://doi.org/10.1002/mrm.29478

Sandgaard, A. D., Shemesh, N., Jespersen, S. N. & Kiselev, V. G. (2023). To mask or not to mask? Investigating the impact of accounting for spatial frequency distributions and susceptibility sources on QSM quality. Magnetic Resonance in Medicine, 90(1), 353-362. https://doi.org/10.1002/mrm.29627

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2023). Towards microstructure-informed QSM: A digital phantom study. 1039. Abstract from ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Ontario, Canada.

Alves, R., Henriques, R. N., Kerkelä, L., Chavarrías, C., Jespersen, S. N. & Shemesh, N. (2022). Correlation Tensor MRI deciphers underlying kurtosis sources in stroke. NeuroImage, 247, Article 118833. https://doi.org/10.1016/j.neuroimage.2021.118833

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2022). Diffusion time dependence, power-law scaling, and exchange in gray matter. NeuroImage, 251, Article 118976. https://doi.org/10.1016/j.neuroimage.2022.118976

Jespersen, S. N. (2022). Editor's Choice: What does filter exchange imaging measure? NMR in Biomedicine, 35(12), Article e4829. https://doi.org/10.1002/nbm.4829

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Incorporating Orientation-Dependent Susceptibility Effects in the Standard Model of Diffusion in White Matter. Abstract from ISMRM Workshop on Diffusion MRI
, Amsterdam, Netherlands.

Sandgaard, A. D., Shemesh, N., Jespersen, S. & Kiselev, V. G. (2022). Masking the measured volume improves QSM quality. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Angleys, H. & Østergaard, L. (2022). Modeling the measurement bias in interstitial glucose concentrations derived from microdialysis in skeletal muscle. Physiological Reports, 10(8), Article e15252. https://doi.org/10.14814/phy2.15252

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. (2022). Tensor denoising of high-dimensional MRI data.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). The Larmor Frequency of a White Matter Magnetic Microstructure Model with Multiple Sources. 2458. Abstract from Joint Annual Meeting ISMRM-ESMRMB
& ISMRT 31st Annual Meeting, London, United Kingdom.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Towards microstructure-informed QSM: A digital phantom study. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Olesen, J. L., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2021). Beyond the diffusion standard model in fixed rat spinal cord with combined linear and planar encoding. NeuroImage, 231, Article 117849. https://doi.org/10.1016/j.neuroimage.2021.117849

Koch, K. U., Mikkelsen, I. K., Espelund, U. S., Angleys, H., Tietze, A., Oettingen, G. V., Juul, N., Østergaard, L. & Rasmussen, M. (2021). Cerebral Macro- and Microcirculation during Ephedrine versus Phenylephrine Treatment in Anesthetized Brain Tumor Patients: A Randomized Clinical Trial Using Magnetic Resonance Imaging. Anesthesiology, 135(5), 788-803. https://doi.org/10.1097/ALN.0000000000003877

Henriques, R. N., Palombo, M., Jespersen, S. N., Shemesh, N., Lundell, H. & Ianuş, A. (2021). Double diffusion encoding and applications for biomedical imaging. Journal of Neuroscience Methods, 348, Article 108989. https://doi.org/10.1016/j.jneumeth.2020.108989

Fernandes, F., Gil, R., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Enhanced conventional and ultrafast responses in preclinical functional MRI using MP-PCA denoising. 2915. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2021). Evidence for microscopic kurtosis in neural tissue revealed by correlation tensor MRI. Magnetic Resonance in Medicine, 86(6), 3111-3130. https://doi.org/10.1002/mrm.28938

Thaler, C., Kyselyova, A. A., Faizy, T. D., Nawka, M. T., Jespersen, S., Hansen, B., Stellmann, J.-P., Heesen, C., Stürner, K. H., Stark, M., Fiehler, J., Bester, M. & Gellißen, S. (2021). Heterogeneity of multiple sclerosis lesions in fast diffusional kurtosis imaging. PLoS One, 16(2), Article e0245844. https://doi.org/10.1371/journal.pone.0245844

Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Intra-compartmental kurtosis biases tensor-valued multidimensional diffusion. 2463. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting. https://www.ismrm.org/21/program-files/TeaserSlides/TeasersPresentations/2463-Teaser.html

Næss-Schmidt, E. T., Udby Blicher, J., Møller Thastum, M., Rask, C. U., Wulff Svendsen, S., Schröder, A., Tuborgh, A. H., Østergaard, L., Sangill, R., Lund, T., Nørhøj Jespersen, S., Pedersen, A. R., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2021). Microstructural changes in the brain after long-term post-concussion symptoms: A randomized trial. Journal of Neuroscience Research, 99(3), 872-886. https://doi.org/10.1002/jnr.24773

Simoes, R., Henriques, R. N., Cardoso, B., Fernandes, F., Olesen, J. L., Jespersen, S. & Shemesh, N. (2021). Non-invasive assessment of glycolytic and oxidative metabolism in mouse glioma using DGE 2H-MRS. 3718. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Olesen, J. L., Shemesh, N. & Jespersen, S. (2021). Power-law scaling of the diffusion signal in gray matter and the influence of exchange. 0643. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Vukovic, N., Hansen, B., Lund, T. E., Jespersen, S. & Shtyrov, Y. (2021). Rapid microstructural plasticity in the cortical semantic network following a short language learning session. PLoS Biology, 19(6), Article e3001290. https://doi.org/10.1371/journal.pbio.3001290

Alves, R., Henriques, R. N., Jespersen, S. & Shemesh, N. (2021). Resolving the underlying sources of diffusion kurtosis in focal ischemia by Correlation Tensor MRI. 0403. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Sandgaard, A. D., Kiselev, V., Shemesh, N. & Jespersen, S. (2021). Rotation-Free Mapping of Magnetic Tissue Properties in White Matter. 3967. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. N., Jones, D. K. & Veraart, J. (2021). Toward more robust and reproducible diffusion kurtosis imaging. Magnetic Resonance in Medicine, 86(3), 1600-1613. https://doi.org/10.1002/mrm.28730

Henriques, R. N., Jespersen, S., Jones, D. K. & Veraart, J. (2021). Towards more robust and reproducible Diffusion Kurtosis Imaging. 2464. Abstract from 2021 International Society for Magnetic Resonance in Medicine annual meeting.

Henriques, R. N., Jespersen, S. & Shemesh, N. (2020). Correlation Tensor Imaging - resolving non-Gaussian diffusion sources of in vivo tissues. 0717. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2020). Correlation tensor magnetic resonance imaging. NeuroImage, 211, Article 116605. https://doi.org/10.1016/j.neuroimage.2020.116605

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. N. (2020). Diffusion Kurtosis Imaging maps neural damage in the EAE model of multiple sclerosis. NeuroImage, 208, Article 116406. https://doi.org/10.1016/j.neuroimage.2019.116406

Simoes, R., Isturiz, J., Lynge Olesen, J., Jespersen, S. & Shemesh, N. (2020). Dynamic assessment of early metabolic perturbations in glioma-bearing mice using denoised 2H-MRS. 0475. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Angleys, H. & Østergaard, L. (2020). Krogh's capillary recruitment hypothesis, 100 years on: Is the opening of previously closed capillaries necessary to ensure muscle oxygenation during exercise? A J P: Heart and Circulatory Physiology (Online), 318(2), H425-H447. https://doi.org/10.1152/ajpheart.00384.2019

Henriques, R. N., Olesen, J. L., Jespersen, S. & Shemesh, N. (2020). Measuring the full diffusional intra- and inter-compartmental kurtosis tensors using double diffusion encoding. 0742. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Coelho, S., Pozo, J. M., Jespersen, S., Frangi, A. F., Novikov, D. S. & Fieremans, E. (2020). Optimal experimental design in multidimensional diffusion MRI for parameter estimation of biophysical tissue models. 0731. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Sandgaard, A. D. & Jespersen, S. (2020). Sharper Images in Quantitative Susceptibility Mapping with Magnetometric Dipole Kernels. 3197. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Lynge Olesen, J. & Jespersen, S. (2020). Stick power law scaling in neurons withstands realistic curvature and branching. 0716. Abstract from International Society for Magnetic Resonance in Medicine Annual Meeting.

Lee, H.-H., Jespersen, S. N., Fieremans, E. & Novikov, D. S. (2020). The impact of realistic axonal shape on axon diameter estimation using diffusion MRI. NeuroImage, 223, Article 117228. https://doi.org/10.1016/j.neuroimage.2020.117228

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Beyond the Standard Model in Spinal Cord. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Anzabi, M., Angleys, H., Aamand, R., Ardalan, M., Mouridsen, K., Rasmussen, P. M., Sørensen, J. C. H., Plesnila, N., Østergaard, L. & Iversen, N. K. (2019). Capillary flow disturbances after experimental subarachnoid hemorrhage: a contributor to delayed cerebral ischemia? Microcirculation, 26(3), Article e12516. https://doi.org/10.1111/micc.12516

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). Correlation Tensor Imaging (CTI): resolving diffusion sources of non-Gaussian diffusion. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Chuhutin, A., Hansen, B., Wlodarczyk, A., Owens, T., Shemesh, N. & Jespersen, S. (2019). Diffusion Kurtosis Imaging (DKI) Biomarkers correlate with dysfunction in the EAE model of MS. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Næss-Schmidt, E., Blicher, J. U., Møller, M. T., Rask, C. U., Svendsen, S. W., Schröder, A., Tuborgh, A. H., Østergaard, L., Jespersen, S., Hansen, B., Eskildsen, S. F. & Nielsen, J. F. (2019). Diffusion kurtosis imaging in patients with prolonged post-concussion symptoms. Journal of Psychosomatic Research, 121, 123. https://doi.org/10.1016/j.jpsychores.2019.03.073

Coelho, S., Pozo, J. M., Jespersen, S., Jones, D. K. & Frangi, A. F. (2019). Double diffusion encoding enables unique parameter estimation of the Standard Model in diffusion MRI. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Valette, J., Ronen, I. & Jespersen, S. N. (2019). Editorial: Assessing cellular microstructure in biological tissues using in vivo diffusion-weighted magnetic resonance. Frontiers in Physics, 7, Article 37. https://doi.org/10.3389/fphy.2019.00037

Jespersen, S., Fieremans, E. & Novikov, D. S. (2019). Effective medium theory of multiple diffusion encoding. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Jespersen, S., Lynge Olesen, J., Ianuş, A. & Shemesh, N. (2019). Effects of nongaussian diffusion on “isotropic diffusion“ measurements: an ex-vivo microimaging and simulation study. Journal of Magnetic Resonance, 300, 84-94. https://doi.org/10.1016/j.jmr.2019.01.007

Does, M. D., Olesen, J. L., Harkins, K. D., Serradas-Duarte, T., Gochberg, D. F., Jespersen, S. N. & Shemesh, N. (2019). Evaluation of principal component analysis image denoising on multi-exponential MRI relaxometry. Magnetic Resonance in Medicine, 81(6), 3503-3514. https://doi.org/10.1002/mrm.27658

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D. & Jespersen, S. (2019). Functional and microstructural alterations in the rat hippocampus after repetitive mild traumatic brain injury. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Khan, A. R., Hansen, B., Iversen, N. K., Olesen, J. L., Angoa-Perez, M., M. Kuhn, D., Østergaard, L. & Jespersen, S. (2019). Longitudinal, multiparametric MRI of repetitive mild traumatic brain injury in rats. 53-54. Abstract from Neuroscience Day 2019, Aarhus, Denmark.

Henriques, R. N., Jespersen, S. N. & Shemesh, N. (2019). Microscopic anisotropy misestimation in spherical-mean single diffusion encoding MRI. Magnetic Resonance in Medicine, 81(5), 3245-3261. https://doi.org/10.1002/mrm.27606

Khan, A. R., Hansen, B., Danladi, J., Chuhutin, A., Wiborg, O., Nyengaard, J. R. & Jespersen, S. (2019). Neurite atrophy in dorsal hippocampus of rat indicates incomplete recovery of chronic mild stress induced depression: Neurite atrophy in the hippocampus show partial recovery of depression. NMR in Biomedicine, 32(3), Article e4057. https://doi.org/10.1002/nbm.4057

Coelho, S., Pozo, J. M., Jespersen, S. N. & Frangi, A. F. (2019). Optimal Experimental Design for Biophysical Modelling in Multidimensional Diffusion MRI. In D. Shen, T. Liu, T. M. Peters, L. H. Staib, C. Essert, S. Zhou, P.-T. Yap & A. Khan (Eds.), Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings: Proceedings (Vol. III, pp. 617-625). Springer. https://doi.org/10.1007/978-3-030-32248-9_69

Olesen, J. L., Shemesh, N. & Jespersen, S. (2019). Propagation of Bias in Moment-Matching Based Standard Model Parameter Estimation. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Novikov, D. S., Fieremans, E., Jespersen, S. N. & Kiselev, V. G. (2019). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation. NMR in Biomedicine, 32(4), Article e3998. https://doi.org/10.1002/nbm.3998

Coelho, S., Pozo, J. M., Jespersen, S. N., Jones, D. K. & Frangi, A. F. (2019). Resolving degeneracy in diffusion MRI biophysical model parameter estimation using double diffusion encoding. Magnetic Resonance in Medicine, 82(1), 395-410. https://doi.org/10.1002/mrm.27714

Henriques, R. N., Jespersen, S. & Shemesh, N. (2019). The two-compartment diffusion “standard model” misestimates microscopic anisotropy in-vivo. Abstract from International Society of Magnetic Resonance in Medicine 2019, Montreal, Quebec, Canada.

Ianuş, A., Jespersen, S. N., Serradas Duarte, T., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2018). Accurate estimation of microscopic diffusion anisotropy and its time dependence in the mouse brain. NeuroImage, 183, 934-949. https://doi.org/10.1016/j.neuroimage.2018.08.034

Ianus, A., Jespersen, S., Drobjnak, I. & Shemesh, N. (2018). Accurate Estimation of Microscopic Diffusion Anisotropy Using Multi-shell Double Diffusion Encoding. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Khan, A. R., Kroenke, C. D., Wiborg, O., Chuhutin, A., Nyengaard, J. R., Hansen, B. & Jespersen, S. (2018). Differential microstructural alterations in rat cerebral cortex in a model of chronic mild stress depression. PLoS One, 13(2), e0192329. Article https://doi.org/10.1371/journal.pone.0192329. https://doi.org/10.1371/journal.pone.0192329

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. D. & Jespersen, S. (2018). Diffusion MRI and MR spectroscopy reveal microstructural and metabolic brain alterations in chronic mild stress exposed rats: A CMS recovery study. NeuroImage, 167, 342-353. https://doi.org/10.1016/j.neuroimage.2017.11.053

Næss-Schmidt, E. T., Blicher, J. U., Tietze, A., Rask, C. U., Svendsen, S. W., Schröder, A., Thastum, M. M., Tuborgh, A. H., Frederiksen, O.-V., Østergaard, L., Eskildsen, S. F., Hansen, B., Jespersen, S. & Nielsen, J. F. (2018). Diffusion MRI findings in patients with extensive and minimal post-concussion symptoms after mTBI and healthy controls - a cross sectional study. Brain Injury, 32(1), 91-98. https://doi.org/10.1080/02699052.2017.1377352

Jespersen, S. N., Olesen, J. L., Hansen, B. & Shemesh, N. (2018). Diffusion time dependence of microstructural parameters in fixed spinal cord. NeuroImage, 182, 329-342. https://doi.org/10.1016/j.neuroimage.2017.08.039

Gutierrez-Jimenez, E., Angleys, H., Rasmussen, P. M., West, M. J., Catalini, L., Iversen, N. K., Jensen, M. S., Frische, S. & Ostergaard, L. (2018). Disturbances in the control of capillary flow in an aged APP(swe)/PS1 Delta E9 model of Alzheimer's disease. Neurobiology of Aging, 62, 82-94. https://doi.org/10.1016/j.neurobiolaging.2017.10.006

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). Evaluation of Marchenko-Pastur PCA denoising on Multi-Exponential Relaxometry. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Does, M., Olesen, J. L., Harkins, K., Serradas-Duarte, T., Jespersen, S. & Shemesh, N. (2018). EVALUATION OF PCA DENOISING OF MRI RELAXOMETRY DATA. In Proceedings of 2018 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2018)

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. (2018). Ex-vivo diffusion MRI reveals microstructural alterations in stress-sensitive brain regions: A chronic mild stress recovery study. Abstract from Joint ISMRM and ESMRMB conference, Paris, Paris, France.

Jespersen, S., Olesen, J. L., Ianus, A. & Shemesh, N. (2018). Implications of nongaussian diffusion on the interpretation of multidimensional diffusion measurements. Proceedings of the International Society for Magnetic Resonance in Medicine, 26.

Khan, A. R., Hansen, B., Iversen, N. K., Angoa-Perez, M., Kuhn, D. & Jespersen, S. (2018). Longitudinal metabolic alterations in the cerebral cortex of rats after repetitive mild traumatic brain injury. 1.

Khan, A. R., Jespersen, S., Wiborg, O., Kroenke, C. & Hansen, B. (2018). Microstructural and Metabolic Recovery of Anhedonic Rat Brains: An In Vivo Diffusion MRI and 1H-MRS Approach. Data, 3(3), Article 29. https://doi.org/10.3390/data3030029

Novikov, D. S., Kiselev, V. & Jespersen, S. (2018). On modeling. Magnetic Resonance in Medicine, 79(6), 3172– 3193. https://doi.org/10.1002/mrm.27101

Bay, V., Kjølby, B. F., Iversen, N. K., Mikkelsen, I. K., Ardalan, M., Nyengaard, J. R., Jespersen, S. N., Drasbek, K. R., Østergaard, L. & Hansen, B. (2018). Stroke infarct volume estimation in fixed tissue: Comparison of diffusion kurtosis imaging to diffusion weighted imaging and histology in a rodent MCAO model. PLoS One, 13(4), e0196161. Article e0196161. https://doi.org/10.1371/journal.pone.0196161

Angleys, H., Jespersen, S. & Østergaard, L. (2018). The effects of capillary transit time heterogeneity (CTH) on the BOLD signal. Human Brain Mapping, 39(6), 2329-2352. https://doi.org/10.1002/hbm.23991

Gutiérrez-Jiménez, E., Angleys, H., Rasmussen, P. M., Mikkelsen, I. K., Mouridsen, K. & Østergaard, L. (2018). The effects of hypercapnia on cortical capillary transit time heterogeneity (CTH) in anesthetized mice. Journal of Cerebral Blood Flow and Metabolism, 38(2), 290-303. Article 271678X17692598. https://doi.org/10.1177/0271678X17692598

Engedal, T. S., Hjort, N., Hougaard, K. D., Simonsen, C. Z., Andersen, G., Mikkelsen, I. K., Boldsen, J. K., Eskildsen, S. F., Hansen, M. B., Angleys, H., Jespersen, S. N., Pedraza, S., Cho, T.-H., Serena, J., Siemonsen, S., Thomalla, G., Nighoghossian, N., Fiehler, J., Mouridsen, K. & Østergaard, L. (2018). Transit time homogenization in ischemic stroke - A novel biomarker of penumbral microvascular failure? Journal of Cerebral Blood Flow and Metabolism, 38(11), 2006-2020. https://doi.org/10.1177/0271678X17721666

Jespersen, S. (2018). White matter biomarkers from diffusion MRI. Journal of Magnetic Resonance, 291, 127-140. https://doi.org/10.1016/j.jmr.2018.03.001

Jespersen, S. N., Olesen, J. L., Ianuş, A. & Shemesh, N. (2017). Anisotropy in "isotropic diffusion" measurements due to nongaussian diffusion. http://arxiv.org/abs/1712.02290

Nielsen, R. B., Egefjord, L., Angleys, H., Mouridsen, K., Gejl, M., Møller, A., Brock, B., Brændgaard, H., Gottrup, H., Rungby, J., Eskildsen, S. F. & Østergaard, L. (2017). Capillary dysfunction is associated with symptom severity and neurodegeneration in Alzheimer's disease. Alzheimer's & Dementia, 13(10), 1143-1153. https://doi.org/10.1016/j.jalz.2017.02.007

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Nielsen, R. B., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Lund, T. E., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2017). Increased cortical capillary transit time heterogeneity in Alzheimer’s disease: a DSC-MRI perfusion study. Neurobiology of Aging, 50, 107-118. https://doi.org/10.1016/j.neurobiolaging.2016.11.004

Nunes, D., Cruz, T. L., Jespersen, S. N. & Shemesh, N. (2017). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. Journal of Magnetic Resonance, 277, 117. https://doi.org/10.1016/j.jmr.2017.02.017

Næss-Schmidt, E. T., Blicher, J. U., Eskildsen, S. F., Tietze, A., Hansen, B., Stubbs, P. W., Jespersen, S., Østergaard, L. & Nielsen, J. F. (2017). Microstructural changes in the thalamus after mild traumatic brain injury: A longitudinal diffusion and mean kurtosis tensor MRI study. Brain Injury, 31(2), 230-236. https://doi.org/10.1080/02699052.2016.1229034

Chuhutin, A., Hansen, B. & Jespersen, S. N. (2017). Precision and accuracy of diffusion kurtosis estimation and the influence of b-value selection. NMR in Biomedicine, 30(11), Article e3777. https://doi.org/10.1002/nbm.3777

Hansen, B. & Jespersen, S. (2017). Recent developments in fast kurtosis imaging. Frontiers in Physics, 5(SEP), Article 40. https://doi.org/10.3389/fphy.2017.00040

Garza-Villarreal, E. A., Chakravarty, M. M., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2017). The effect of crack cocaine addiction and age on the microstructure and morphology of the human striatum and thalamus using shape analysis and fast diffusion kurtosis imaging. Translational Psychiatry, 7(5), Article 1122. https://doi.org/10.1038/tp.2017.92

Lynge Olesen, J., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time dependence of kurtosis and intra-and extra-axonal diffusivity using axisymmetric diffusion kurtosis imaging. Poster session presented at ISMRM Workshop on Quantitative MRI in White Matter Disorders: Useful, Usable, Used?, Vancouver, Canada.

Ianus, A., Jespersen, S. N., Alexander, D. C., Drobnjak, I. & Shemesh, N. (2017). Time Dependence of Microscopic Anisotropy in the Mouse Brain Measured with Double Oscillating Diffusion Encoding (DODE) MRI. In Proceedings of ISMRM 25th Annual Meeting (Vol. 25, pp. 0277)

Olesen, J. L., Hansen, B., Shemesh, N. & Jespersen, S. N. (2017). Time Dependence of White Matter Biomarkers from Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 0841)

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Eskildsen, S. F., Østergaard, L. & Jespersen, S. N. (2017). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging. NMR in Biomedicine, 30(9), Article e3741. https://doi.org/10.1002/nbm.3741

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2017). White Matter Biomarkers from Fast Protocols Using Axially Symmetric Diffusion Kurtosis Imaging. In Proceedings of ISMRM 25th Annual Meeting (pp. 1742)

Lasic, S., Jespersen, S. N., Lundell, H., Nilsson, M., Dyrby, T. & Topgaard, D. (2016). Apparent Exchange Rate in Multi-Compartment Anisotropic Tissue. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Biophysical modeling of high field diffusion MRI demonstrates micro-structural aberration in chronic mild stress rat brain. NeuroImage, 142, 421-430. https://doi.org/10.1016/j.neuroimage.2016.07.001

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2016). Capillary dysfunction in Alzheimer’s disease correlates with cognitive decline. Abstract from 10th FENS FORUM of Neuroscience 2016, København, Denmark.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Chronic Mild Stress Induces Changes in Neurite Density in the Amygdala as Revealed by Diffusion MRI and Validated with Novel Histological Analyses. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Hansen, B. & Jespersen, S. N. (2016). Data for evaluation of fast kurtosis imaging, b-value optimization and exploration of diffusion MRI contrast. Scientific Data, 3, Article 160072. https://doi.org/10.1038/sdata.2016.72

Gutiérrez-Jiménez, E., Cai, C., Mikkelsen, I. K., Rasmussen, P. M., Angleys, H., Merrild, M., Mouridsen, K., Jespersen, S. N., Lee, J., Iversen, N. K., Sakadzic, S. & Østergaard, L. (2016). Effect of electrical forepaw stimulation on capillary transit-time heterogeneity (CTH). Journal of Cerebral Blood Flow and Metabolism, 36(12), 2072-2086. https://doi.org/10.1177/0271678X16631560

Kjølby, B. F., Khan, A. R., Chuhutin, A., Pedersen, L. H., Jensen, J. B., Jakobsen, S., Zeidler, D., Sangill, R., Nyengaard, J. R., Jespersen, S. N. & Hansen, B. (2016). Fast diffusion kurtosis imaging of fibrotic mouse kidneys. NMR in Biomedicine, 29(12), 1709.

Hansen, B., Shemesh, N. & Jespersen, S. N. (2016). Fast imaging of mean, axial and radial diffusion kurtosis. NeuroImage, 142, 381. https://doi.org/10.1016/j.neuroimage.2016.08.022

Hansen, B. & Jespersen, S. N. (2016). Kurtosis fractional anisotropy: its contrast and estimation by proxy. Scientific Reports, 6(23999), Article 23999.

Nunes, D., Cruz, T. L., Jespersen, S. & Shemesh, N. (2016). Mapping axonal density and average diameter using non-monotonic time-dependent gradient-echo MRI. ArXiv.

Novikov, D. S., Jespersen, S. N., Kiselev, V. G. & Fieremans, E. (2016). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

Khan, A. R., Chuhutin, A., Wiborg, O., Kroenke, C. D., Nyengaard, J. R., Hansen, B. & Jespersen, S. N. (2016). Summary of high field diffusion MRI and microscopy data demonstrate microstructural aberration in chronic mild stress rat brain. Data in Brief, 8, 934-937. https://doi.org/10.1016/j.dib.2016.06.061

Nunes, D., Cruz, T., Jespersen, S. N. & Shemesh, N. (2016). Susceptibility-Driven Oscillations in Multi-Gradient-Echo MRI Reflect Axonal Microstructures. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Garza-Villarreal, E. A., Mallar, C., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2016). The effect of crack cocaine addiction on the microstructure and morphology of the human striatum and thalamus using novel shape analysis and fast diffusion kurtosis imaging. (066647 ed.) https://doi.org/10.1101/066647

Angleys, H., Jespersen, S. & Østergaard, L. (2016). The effects of capillary transit time heterogeneity (CTH) on the cerebral uptake of glucose and glucose analogs: Application to FDG and comparison to oxygen uptake. Frontiers in Computational Neuroscience, 10(OCT), Article 103. https://doi.org/10.3389/fncom.2016.00103

Chuhutin, A., Shemesh, N., Hansen, B. & Jespersen, S. N. (2016). The Importance of B-Values Selection and the Precision of Diffusion Kurtosis Estimation by the Conventional Schemes. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Jespersen, S. N., Hansen, B., Nunes, D. & Shemesh, N. (2016). Time Dependence of Diffusion and Kurtosis Parameters in the Rat Spinal Cord. Abstract from ISMRM 2016 Annual Meeting & Exhibition, Singapore, Singapore.

Hansen, B., Khan, A. R., Shemesh, N., Lund, T. E., Sangill, R., Østergaard, L. & Jespersen, S. N. (2016). White matter biomarkers from fast protocols using axially symmetric diffusion kurtosis imaging.

Khan, A. R., Cornea, A., Leigland, L. A., Kohama, S. G., Jespersen, S. N. & Kroenke, C. D. (2015). 3D structure tensor analysis of light microscopy data for validating diffusion MRI. NeuroImage, 111, 192-203. https://doi.org/10.1016/j.neuroimage.2015.01.061

Khan, A. R., Chuhutin, A., Hansen, B., Wiborg, O., Kroenke, C. & Jespersen, S. N. (2015). Biophysical Modeling of High Field Diffusion MRI Demonstrates Micro-Structural Aberration in Chronic Mild Stress (CMS) Rat Brain. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Østergaard, L., Jespersen, S. N., Engedal, T. S., Jiménez, E. G., Ashkanian, M., Hansen, M. B., Eskildsen, S. & Mouridsen, K. (2015). Capillary dysfunction: Its detection and causative role in dementias and stroke. Current Neurology and Neuroscience Reports, 15(6), 37. https://doi.org/10.1007/s11910-015-0557-x

Shemesh, N., Jespersen, S. N., Alexander, D. C., Cohen, Y., Drobnjak, I., Dyrby, T. B., Finsterbusch, J., Koch, M. A., Kuder, T., Laun, F., Lawrenz, M., Lundell, H., Mitra, P. P., Nilsson, M., Özarslan, E., Topgaard, D. & Westin, C.-F. (2015). Conventions and nomenclature for double diffusion encoding NMR and MRI. Magnetic Resonance in Medicine, 75(1), 82-87. https://doi.org/10.1002/mrm.25901

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M. B., Dalby, R. B., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2015). Cortical capillary dysfunction in patients suspected of Alzheimer’s disease. Abstract from The Alzheimer's Association International Conference 2015, Washington D.C., United States. https://doi.org/10.1016/j.jalz.2015.06.1767

Kjølby, B. F., Jakobsen, S., Jensen, J., Pedersen, L. H., Rydtoft, L. M., Jespersen, S. N. & Hansen, B. (2015). Diffusion Kurtosis Imaging of Fibrotic Mouse Kidneys. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Haack, S., Tanderup, K., Kallehauge, J. F., Mohamed, S. M. I., Lindegaard, J. C., Pedersen, E. M. & Jespersen, S. N. (2015). Diffusion-weighted magnetic resonance imaging during radiotherapy of locally advanced cervical cancer - treatment response assessment using different segmentation methods. Acta Oncologica, 54(9), 1535-1542. https://doi.org/10.3109/0284186X.2015.1062545, https://doi.org/10.3109/0284186X.2015.1062545

Hansen, B., Lund, T. E., Sangill, R., Stubbe, E., Finsterbusch, J. & Jespersen, S. N. (2015). Experimental considerations for fast kurtosis imaging. Magnetic Resonance in Medicine, 76, 1455-1468. https://doi.org/10.1002/mrm.26055

Tietze, A., Hansen, M. B., Østergaard, L., Jespersen, S. N., Sangill, R., Lund, T. E., Geneser, M., Hjelm, M. & Hansen, B. (2015). Mean Diffusional Kurtosis in Patients with Glioma: Initial Results with a Fast Imaging Method in a Clinical Setting. American Journal of Neuroradiology, 36(8), 1472-1478. https://doi.org/10.3174/ajnr.A4311

Østergaard, L., Granfeldt, A., Secher, N., Tietze, A., Iversen, N. K., Jensen, M. S., Andersen, K. K., Nagenthiraja, K., Gutiérrez-Lizardi, P., Mouridsen, K., Jespersen, S. N. & Tønnesen, E. K. (2015). Microcirculatory dysfunction and tissue oxygenation in critical illness. Acta Anaesthesiologica Scandinavica, 59(10), 1246-59. https://doi.org/10.1111/aas.12581

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2015). Neurite density from an isotropic diffusion model.

Østergaard, L., Dreier, J. P., Hadjikhani, N., Jespersen, S. N., Dirnagl, U. & Dalkara, T. (2015). Neurovascular coupling during cortical spreading depolarization and -depression. Stroke; a journal of cerebral circulation, 46(5), 1392-401. https://doi.org/10.1161/STROKEAHA.114.008077

Østergaard, L., Finnerup, N. B., Terkelsen, A. J., Olesen, R. A., Drasbek, K. R., Knudsen, L., Jespersen, S. N., Frystyk, J., Charles, M., Thomsen, R. W., Christiansen, J. S., Beck-Nielsen, H., Jensen, T. S. & Andersen, H. (2015). The effects of capillary dysfunction on oxygen and glucose extraction in diabetic neuropathy. Diabetologia, 58(4), 666-677. https://doi.org/10.1007/s00125-014-3461-z

Angleys, H., Østergaard, L. & Jespersen, S. N. (2015). The effects of capillary transit time heterogeneity (CTH) on brain oxygenation. Journal of Cerebral Blood Flow and Metabolism, 35(5), 806-17. https://doi.org/10.1038/jcbfm.2014.254

Rasmussen, P. M., Jespersen, S. N. & Ostergaard, L. (2015). The effects of transit time heterogeneity on brain oxygenation during rest and functional activation. Journal of Cerebral Blood Flow and Metabolism, 35(3), 432-42. https://doi.org/10.1038/jcbfm.2014.213

Chuhutin, A., Khan, A. R., Hansen, B. & Jespersen, S. N. (2015). The Mean Kurtosis Evaluation Measurements Show a Considerable Disparity from the Analytically Evaluated Ones for a Clinically Used Range of B-Values. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Lundell, H., Dyrby, T., Hubbard Cristinacce, P., Zhou, F.-L., Parker, G. & Jespersen, S. N. (2015). Validation of Double Diffusion Schemes of Microscopic Fractional Anisotropy. Abstract from ISMRM 2015 23rd Annual Meeting, Toronto, Canada.

Khan, A. R., Leigland, L., Kohama, S., Cornea, A., Jespersen, S. N. & Kroenke, C. (2014). 3D Structure Tensor Analysis of Light Microscopy Data for Validating Diffusion MRI. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2014). A Fast and Robust Method for Simultaneous Estimation of Mean Diffusivity and Mean Tensor Kurtosis. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Østergaard, L., Terkelsen, A. J., Finnerup, N. B., Knudsen, L., Drasbek, K. R., Jespersen, S. N., Svensson, P., Sørensen, J. C. H. & Jensen, T. S. (2014). Capillary dysfunction and impaired tissue oxygenation in complex regional pain syndrome: A hypothesis. Pain, 155(10), 1922-1926. https://doi.org/10.1016/j.pain.2014.06.005

Østergaard, L., Engedal, T. S., Aamand, R., Mikkelsen, R., Iversen, N. K., Anzabi, M., Næss-Schmidt, E., Drasbek, K. R., Bay, V., Blicher, J., Tietze, A., Mikkelsen, I. K., Hansen, B., Jespersen, S. N., Juul, N., Sørensen, J. CH. & Rasmussen, M. (2014). Capillary transit time heterogeneity and flow-metabolism coupling after traumatic brain injury. Journal of Cerebral Blood Flow and Metabolism, 34(10), 1585-1598. https://doi.org/10.1038/jcbfm.2014.131

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Hansen, M., Dalby, R., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2014). Capillary transit time heterogeneity in the cerebrum correlate with cognitive decline in AD. https://doi.org/10.1016/j.jalz.2014.05.478

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2014). Commentary on "Microanisotropy imaging: quantification of microscopic diffusion anisotropy and orientation of order parameter by diffusion MRI with magic-angle spinning of the q-vector". Frontiers in Physics, 2, Article 28. https://doi.org/10.3389/fphy.2014.00028

Haack, S., Kallehauge, J. F., Jespersen, S. N., Lindegaard, J. C., Tanderup, K. & Pedersen, E. M. (2014). Correction of diffusion-weighted magnetic resonance imaging for brachytherapy of locally advanced cervical cancer. Acta Oncologica, 53(8), 1073-1078. https://doi.org/10.3109/0284186X.2014.938831

Haack, S., Tanderup, K., Kallehauge, J., Lindegaard, J. C., Morre-Pedersen, E. & Jespersen, S. N. (2014). Diffusion Weighted MRI for Radiotherapy Treatment of Locally Advanced Cervical Cancer – Treatment Response Assessment Using Different Segmentation Methods. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2014). Erratum: Hansen, Lund, Sangill, and Jespersen. Experimentally and Computationally Fast Method for Estimation of a Mean Kurtosis. Magnetic Resonance in Medicine 69:1754–1760 (2013). Magnetic Resonance in Medicine, 71(6), 2250. https://doi.org/10.1002/mrm.25090

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2014). Erratum: Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments. NMR in Biomedicine, 27(6), 738-738. https://doi.org/10.1002/nbm.3125

Rydtoft, L. M., Hansen, B., Hansen, M. B. & Jespersen, S. N. (2014). Experimentally Estimated Non-Gaussian Water Diffusion at a Large Range of B-Values. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

Mouridsen, K., Hansen, M. B., Østergaard, L. & Jespersen, S. N. (2014). Reliable estimation of capillary transit time distributions using DSC-MRI. Journal of Cerebral Blood Flow and Metabolism, 34(9), 1511-21. https://doi.org/10.1038/jcbfm.2014.111

Østergaard, L., Kristiansen, S. B., Angleys, H., Frøkiær, J., Michael Hasenkam, J., Jespersen, S. N. & Bøtker, H. E. (2014). The role of capillary transit time heterogeneity in myocardial oxygenation and ischemic heart disease. Basic Research in Cardiology, 109(3), Article 409. https://doi.org/10.1007/s00395-014-0409-x

Østergaard, L., Nagenthiraja, K., Gyldensted, L., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & West, M. J. (2013). Capillary Dysfunction in Alzheimer's Disease. Poster session presented at Alzheimer's Association International Conference, Boston, United States.

Jespersen, S. N. (2013). Comment on “Measuring small compartments with relatively weak gradients by angular double-pulsed-field-gradient NMR” by Morozov Bar, Sochen, and Cohen. Magnetic Resonance Imaging, 31(9), 1643-1644. https://doi.org/10.1016/j.mri.2013.07.006

Haack, S., Tanderup, K., Fokdal, L., Kallehauge, J. F., Lindegaard, J. C., Jespersen, S. N. & Pedersen, E. M. (2013). Diffusion Weighted MRI as a predictive tool for effect of radiotherapy in locally advanced cervical cancer. Poster session presented at ISMRM 2013, Salt Lake City, United States.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2013). Experimentally and computationally fast method for estimation of a mean kurtosis. Abstract from International Society for Magnetic Resonance in Medicine 21st Annual Meeting and Exhibition, Salt Lake City, UT, United States.

Hansen, B., Lund, T. E., Sangill, R. & Jespersen, S. N. (2013). Experimentally and computationally fast method for estimation of a mean kurtosis. Magnetic Resonance in Medicine, 69(6), 1754-1760. https://doi.org/10.1002/mrm.24743

Eskildsen, S. F., Gyldensted, L., Nagenthiraja, K., Frandsen, J., Rodell, A., Gyldensted, C., Jespersen, S. N., Mouridsen, K., Brændgaard, H. & Østergaard, L. (2013). Increased cerebral oxygen extraction capacity in patients with Alzheimer’s disease. Abstract from Alzheimer's Association International Conference, Boston, United States. https://doi.org/10.1016/j.jalz.2013.05.173

Jespersen, S. N., Lundell, H., Sønderby, C. K. & Dyrby, T. B. (2013). Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments. NMR in Biomedicine, 26, 1647-1662. https://doi.org/10.1002/nbm.2999

Jespersen, S. N., Lundell, H., Sønderby, C. & Dyrby, T. (2013). Rotationally invariant double pulsed field gradient diffusion imaging. Abstract from ISMRM 2013, Salt Lake City, United States.

Østergaard, L., Aamand, R., Gutiérrez Jiménez, E., Ho, Y. C. L., Blicher, J., Madsen, S. M., Nagenthiraja, K., Dalby, R. B., Drasbek, K. R., Møller, A., Brændgaard, H., Mouridsen, K., Jespersen, S. N., Jensen, M. S. & West, M. J. (2013). The capillary dysfunction hypothesis of Alzheimer's disease. Neurobiology of Aging, 34(4), 1018-31. https://doi.org/10.1016/j.neurobiolaging.2012.09.011

Østergaard, L., Tietze, A., Nielsen, T., Drasbek, K. R., Mouridsen, K., Jespersen, S. N. & Horsman, M. R. (2013). The relationship between tumor blood flow, angiogenesis, tumor hypoxia, and aerobic glycolysis. Cancer Research, 73(18), 5618-5624. https://doi.org/10.1158/0008-5472.CAN-13-0964

Hansen, M. B., Jespersen, S. N., Leighland, L. & Kroenke, C. (2013). Using diffusion anisotropy to characterize neuronal morphology in gray matter: the orientation distribution of axons and dendrites in the NeuroMorpho.org database. Frontiers in Integrative Neuroscience, 7.

Haack, S., Pedersen, E. M., Vinding, M. S., Kallehauge, J., Lindegaard, J. C., Tanderup, K. & Jespersen, S. N. (2012). B0-correction and k-means clustering for accurate and automatic identification of regions with reduced apparent diffusion coefficient (ADC) in adva nced cervical cancer at the time of brachytherapy. Poster session presented at ISMRM 20TH Annual Meeting & Exhibition, Melbourne, Australia.

Jespersen, S. N., Leigland, L., Cornea, A. & Kroenke, C. (2012). Determination of Axonal and Dendritic Orientation Distributions Within the Developing Cerebral Cortex by Diffusion Tensor Imaging. IEEE Transactions on Medical Imaging, 31(1), 16-32. https://doi.org/10.1109/TMI.2011.2162099

Jespersen, S. N. (2012). Equivalence of double and single wave vector diffusion contrast at low diffusion weighting. NMR in Biomedicine, 25(6), 813-818. https://doi.org/10.1002/nbm.1808

Jespersen, S. N. & Østergaard, L. (2012). The roles of cerebral blood flow, capillary transit time heterogeneity, and oxygen tension in brain oxygenation and metabolism. Journal of Cerebral Blood Flow and Metabolism, 32(2), 264-277. https://doi.org/10.1038/jcbfm.2011.153

Vestergaard-Poulsen, P., Wegener, G., Hansen, B., Bjarkam, C. R., Blackband, S. J., Nielsen, N. C. & Jespersen, S. N. (2011). Diffusion-weighted MRI and quantitative biophysical modeling of hippocampal neurite loss in chronic stress. PLoS One, 6(7), e20653. https://doi.org/10.1371/journal.pone.0020653

Haack, S., Jespersen, S. N., Lars, F., Lindegaard, J. C., Kallehauge, J., Tanderup, K. & Pedersen, E. M. (2011). Diffusion Weighted MRI (DWI) for Brachytherapy in Locally Advanced Cervical Cancer - Determining the Degree of Distortion at 1.5T and 3T. International Federation for Medical and Biological Engineering Proceedings, 34, 172-175. http://books.google.dk/books?id=Oo9bujV0NikC&printsec=frontcover&hl=da&source=gbs_ge_summary_r&cad=0#v=onepage&q&f=false

Haack, S., Jespersen, S. N., Fokdal, L., Lindegaard, J. C., Tanderup, K., Kallehauge, J. F. & Pedersen, E. M. (2011). Diffusion weighted MRI (DWI) for brachytherapy in locally advanced cervical cancer - Determining the degree of distortion at 1.5T and 3T MRI. In IFMBE Proceedings (Vol. 34 IFMBE, pp. 172-175) https://doi.org/10.1007/978-3-642-21683-1_43

Vinding, M. S., Maximov, I., Tosner, Z., Jespersen, S. N. & Nielsen, N. C. (2011). Optimal Control Theory in Magnetic Resonance Imaging: Global Optima for 2DRF pulses. Poster session presented at 32nd Annual Danish NMR Meeting, Korsør, Denmark.

Mouridsen, K., Østergaard, L., Christensen, S. & Jespersen, S. N. (2011). Reliable estimation of capillary transit time distributions at voxel-level using DSC-MRI.

Jespersen, S. N. & Buhl, N. (2011). The displacement correlation tensor: Microstructure, ensemble anisotropy and curving fibers. Journal of Magnetic Resonance, 208(1), 34-43.

Haack, S., Pedersen, E. M., Jespersen, S. N., Kallehauge, J. F., Lindegaard, J. C. & Tanderup, K. (2010). Apparent diffusion coefficients in GEC ESTRO target volumes for image guided adaptive brachytherapy of locally advanced cervical cancer. Acta Oncologica, 49(7), 978-83. https://doi.org/10.3109/0284186X.2010.500619

Bock, A. S., Olavarria, J. F., Leigland, L. A., Taber, E. N., Jespersen, S. N. & Kroenke, C. D. (2010). Diffusion tensor imaging detects early cerebral cortex abnormalities in neuronal architecture induced by bilateral neonatal enucleation: an experimental model in the ferret. Frontiers in Systems Neuroscience, 4, 149. https://doi.org/10.3389/fnsys.2010.00149

Buhl, N. & Jespersen, S. N. (2010). Exact results for diffusion weighted MR on branched structures. In Proc. Intl. Soc. Mag. Reson. Med. (Vol. 18)

Jespersen, S. N., Bjarkam, C. R., Nyengaard, J. R., Mallar, C., Hansen, B., Vosegaard, T., Østergaard, L., Yablonskiy, DA., Nielsen, N. C. & Vestergaard-Poulsen, P. (2010). Neurite density from magnetic resonance diffusion measurements at ultrahigh field: comparison with light microscopy and electron microscopy. NeuroImage, 49(1), 205-16. https://doi.org/10.1016/j.neuroimage.2009.08.053

Leigland, L., Jespersen, S. N., Taber, E., Bock, A., Cornea, A., Olivierra, J. & Kroenke, C. (2010). The Complexity of Dendritic Arbors in the Developing Cerebral Cortex Determined by Diffusion Tensor Magnetic Resonance Imaging. Abstract from 51st Experimental Nuclear Magnetic Resonance Conference.

Leigland, L., Jespersen, S. N., Taber, E., Cornea, A. & Kroenke, C. (2009). Characterising Neuronal Morphological Development Using Diffusion Tensor Imaging. In Proc. Intl. Soc. Mag. Reson. Med. (Vol. 17, pp. 3416)

Jespersen, S. N., Leighland, L., Cornea, A. & Kroenke, C. (2009). The diffusion tensor reveals gray matter architecture. Abstract from ISMRM Annual meeting 2009, Honolulu, United States.

Mouridsen, K., Jonsdottir, K. Y., Jespersen, S. N. & Østergaard, L. (2008). Clinical utility of parametric perfusion estimates in prediction of final outcome in acute stroke. Paper presented at International society of magnetic resonance in medicine, annual meeting 2008, Toronto, Canada.

Jespersen, S. N. (2008). Modellering af vanddiffusion i hjernen - et værktøj til måling af fibertæthed?. Poster session presented at Forskningens dag, Århus, Denmark.

Jespersen, S. N., Ashkanian, M., Mouridsen, K. & Østergaard, L. (2008). Modelling the regulation of cerebral oxygen extraction by flow heterogeneity. Poster session presented at Forskningens dag, Århus, Denmark.

Jespersen, S. N., Ashkanian, M., Mouridsen, K. & Østergaard, L. (2008). Modelling the regulation of cerebral oxygen extraction by flow heterogeneity. Abstract from International society of magnetic resonance in medicine, annual meeting 2008, Toronto, Canada.

Hansen, B., Jespersen, S. N. & Vestergaard-Poulsen, P. (2008). MR-mikroskopi giver indblik i hjernens mikrostruktur. Poster session presented at Forskningens Dag 2008, Århus, Denmark.

Frøhlich, A. F., Jespersen, S. N., Østergaard, L. & Kiselev, V. G. (2008). The effect of impermeable boundaries of arbitrary geometry on the apparent diffusion coefficient. Journal of Magnetic Resonance, 194(1), 128-35. https://doi.org/10.1016/j.jmr.2008.06.009

Buhl, N. & Jespersen, S. N. (2007). A simulation framework for diffusion weighted MRI in digitalized neurons: Extracting cytoarchitectural parameters using a new theoretical model for diffusion. Abstract from ISMRM 2007, Berlin, Germany.

Jespersen, S. N., Bjarkam, C., Nielsen, T., Hansen, B. & Vestergaard-Poulsen, P. (2007). Dendrite density from magnetic resonance diffusion measurements: Comparison with histology. Abstract from ISMRM 2007, Berlin, Germany.

Jespersen, S. N. & Gjedde, A. (2007). Dopamine occupancy and dopamine transport inhibition: Lessons from a dynamic model. Abstract from BrainPET'07, Osaka, Japan.

Jespersen, S. N., Kroenke, CD., Østergaard, L., Ackerman, JJ. & Yablonskiy, DA. (2007). Modeling dendrite density from magnetic resonance diffusion measurements. NeuroImage, 34(4), 1473-1486. https://doi.org/10.1016/j.neuroimage.2006.10.037

Jespersen, S. N., Ashkanian, M., Mouridsen, K. & Østergaard, L. (2007). Modeling the regulation of cerebral oxygenextraction by flow heterogeneity. Abstract from Workshop on cerebral perfusion and brain function 2007, Salvador da Bahia, Brazil.

Hansen, B. & Jespersen, S. N. (2007). Vandets tumlen giver viden om hjernen. Aktuel Naturvidenskab, 1, 10-13.

Hansen, B. & Jespersen, S. N. (2007). Vandets tumlen giver viden om hjernen. Aktuel Naturvidenskab, (1), 10-13.

Displaying results 1 to 200 out of 224

Revised 22.09.2025

Henriette Blæsild Vuust